Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00838 ATGGAGTCAAAGTGTTGCATGAACGTTGTTTGTGGAACCACTACGTCGATTCGGTGGTGGAAAGGTTGGATTCTTCGATCCCGTGAATTCGCCGATCTATGTGATAAGTGCGGTTCTGTTTATGAGCAATCAGCGTTTTGCGATATATTCCATGCAAAAGAATCTGGTTGGAGAGAGTGTACTTCATGTGGCAAGCGTCTCCATTGTGGATGTGTTGCTTCAAAGTCTCAGCTTGAAATACTTGACACTGGTGGTGTAAGCTGTATTACCTGTGCAAGTACTTCAGGACTTCAACCTATTGCCAGTAATGAAAAGCCTAATGAATCTGGAACAGCAACAGTAAATAATGTCAGTTCCCAGCAGTGCATATCTCTGGCTAACCAATTAAATGTGAGGGGTATGCAAGTTGGGAATTATGCAGAAAATGACGGGATGAGGTGCTGGCTCAAACCTCACAATGTTGATTTGGATGGACCTACTCGAGAAATCAAACCAGAAGTTTTACCCTCTGTTGGAGAATTTGGAAGCACTTTGATGTCACAATTTCATCGCGAGTCAAATTCTTCATCTAGGACTGGCAAAGCAGAGAATGACATGCAAGATATATATGAATCACTGGCACAGACAAATTTGAGTATGACCCTTGCCGCTCCTTTGCCAAATCCCTTTCATAATGTTCTTGTTGATGAAAGGGAACAAAGCAAAATGTCACCTCCACTTCTATTGGCGTCTAGATCTCGTCATCTTTTACCTAAACCTCCTAGGCCAACTCTATCTCCAGGCTTAGAAGGAAACACAGGCATGGTTTCCCAGATTCGTATAGCAAGGCCTCCTGCCGAAGGACGAGGAAGGAATCAGTTGCTTCCCCGGTATTGGCCCAGAATTACAGATCAAGAGTTGCAGCAAATATCGGGAGATTCAAATTCCACCATTGTGCCACTCTTTGAAAAGATGCTTAGTGCAAGTGATGCTGGTCGAATTGGTCGCTTGGTTCTTCCAAAAGCATGTGCTGAAGCATATTTCCCTCCTATCTCTCAACCTGAGGGCCTTCCTTTGCGTATCCAAGATGTGAAAGGAAAAGAATGGATGTTTCAATTTAGATTTTGGCCAAATAATAATAGCCGGATGTATGTTTTAGAAGGGGTAACCCCCTGTATTCAGTCTATGCAACTGCAAGCTGGCGATACTGTAACATTTAGCCGTATGGACCCTGAGGGGAAACTTATAATGGGGTTCAGGAAGGCAACAAATTCTGCTTCAGTACAGGAAACTTTTCCGTCTAATATGCCCAATGGTTCTCATTCAAGTGAAACTTCCTATTCTGGTGTTTATGAGAATATACCTATATTAAGTGGTTATTCTGGCCTTCTTCAGTCTCAAAAGGGTTGTTCAGAAACCCATCTAAATGCGCTATCTAAAAAGTGGAACTCAGTTGGTGCTGACATGGATTGGCATAATGTAGAAATGCCTGAAAGCAGGAAAAGAGATATGTTGTCTTTACCACCCGTGCTAGTTCCTGAGAAGAAAAGAACTCGAAATATTGGGTCAAAAAGTAAGAGGTTGCTTATTGATAGCGAGGATGCACTGGAGCTGAAACTTACTTGGGAAGAGGCTCAGGATTTACTTCGTCCACCTCCAGAAGTTAAGCCAAGTGTTGTCATGATCGAGGATCACTTATTTGAAGAGTATGAAGAGCCTCCTGTGTTTGGAAAGAAGAGTATATTTGTGGTACGATCTACTGGGATAAGTGAGCAGTGGACACAGTGTGATAGTTGCCAAAAATGGCGGAAGTTACCGGTTGATGTACTTATTCCCCCTAAGTGGACATGTATGGAGAATTTTTGGGATCAAAGCAGGTGTTCATGTGCTGCTCCCAATGAATTGAATCCAAGGGAACTGGATAATCTTTTGAGAATGAACAATGAATTCAAGAAACAAAGACAAGCAGCGGCAAGCCAGAGGCCAGCTCTGGATCGTGAATCTTCTGGTCTTGACGCTTTAGCAAATGCTGCGGTTCTTGGAGATGATGCAAGTGACTCTGGCAGGACACCAGTGTTGACCACTACAAGACACCCTCGTCATAGGCCTGGGTGCTCCTGTATTGTCTGTATCCAGCCACCAAGTGGGAAGGGCAAACACAAACCTACATGCACGTGTAATGTCTGCATGACAGTTAAACGCCGGTTTAAAACCCTAATGATGCGAAAGAAGAAGCGTCAATCTGAGCGTGAAGCTGAGATTGCTCAGAAAAATCAGCAATCATGGAGAACCAAGGATGAATCCGAAGTAGACAGCACCTCTCGACATTTAACTCCAGTTGATGGTTCGGAGAATGAAGCAAGGGTGCCAAATGAATTAGATTCAAGGAACCAAGACCAAGTGGCTGATGCTGCCAAGGGACAATTAGACTTGAATTGCCAACCGGATCGGGAAGACATGCAAGCCGGACCAAACACTCTGAGCATGATGACTCTTCTTGAAGAAGCAAATCTCCCGTTGGAGACATACCTGAAGCAAAATGGTCTTTCTAGCTTGATATCAGAGCAGCAAACAAATTCAGCTTCAAATGTGCAGGCACAGACAACCAATGAGAGTGAGGGAAGACAAAATGAGGATTGCTGTACTGCTTCTGCAGTTCATGAACAGGAAGACAGTCCTGAAGAGAATAGTGGGCAAGACAGAGACCAAAACAATTCACTTTCTTGA 2706 0.4379 MESKCCMNVVCGTTTSIRWWKGWILRSREFADLCDKCGSVYEQSAFCDIFHAKESGWRECTSCGKRLHCGCVASKSQLEILDTGGVSCITCASTSGLQPIASNEKPNESGTATVNNVSSQQCISLANQLNVRGMQVGNYAENDGMRCWLKPHNVDLDGPTREIKPEVLPSVGEFGSTLMSQFHRESNSSSRTGKAENDMQDIYESLAQTNLSMTLAAPLPNPFHNVLVDEREQSKMSPPLLLASRSRHLLPKPPRPTLSPGLEGNTGMVSQIRIARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSTIVPLFEKMLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWMFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKATNSASVQETFPSNMPNGSHSSETSYSGVYENIPILSGYSGLLQSQKGCSETHLNALSKKWNSVGADMDWHNVEMPESRKRDMLSLPPVLVPEKKRTRNIGSKSKRLLIDSEDALELKLTWEEAQDLLRPPPEVKPSVVMIEDHLFEEYEEPPVFGKKSIFVVRSTGISEQWTQCDSCQKWRKLPVDVLIPPKWTCMENFWDQSRCSCAAPNELNPRELDNLLRMNNEFKKQRQAAASQRPALDRESSGLDALANAAVLGDDASDSGRTPVLTTTRHPRHRPGCSCIVCIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREAEIAQKNQQSWRTKDESEVDSTSRHLTPVDGSENEARVPNELDSRNQDQVADAAKGQLDLNCQPDREDMQAGPNTLSMMTLLEEANLPLETYLKQNGLSSLISEQQTNSASNVQAQTTNESEGRQNEDCCTASAVHEQEDSPEENSGQDRDQNNSLS 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00838 901 MobiDBLite consensus disorder prediction 753 767 - -
Mepo2g00838 901 Gene3D - 583 639 - -
Mepo2g00838 901 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 3 853 - -
Mepo2g00838 901 Pfam B3 DNA binding domain 315 414 IPR003340 GO:0003677
Mepo2g00838 901 Coils Coil 633 653 - -
Mepo2g00838 901 MobiDBLite consensus disorder prediction 877 891 - -
Mepo2g00838 901 FunFam B3 domain-containing transcription repressor VAL1 293 420 - -
Mepo2g00838 901 MobiDBLite consensus disorder prediction 848 876 - -
Mepo2g00838 901 Pfam CW-type Zinc Finger 585 627 IPR011124 GO:0008270
Mepo2g00838 901 Gene3D - 293 420 IPR015300 -
Mepo2g00838 901 ProSiteProfiles B3 DNA-binding domain profile. 315 416 IPR003340 GO:0003677
Mepo2g00838 901 SMART B3_2 315 415 IPR003340 GO:0003677
Mepo2g00838 901 MobiDBLite consensus disorder prediction 848 901 - -
Mepo2g00838 901 MobiDBLite consensus disorder prediction 733 792 - -
Mepo2g00838 901 CDD B3_DNA 313 414 IPR003340 GO:0003677
Mepo2g00838 901 ProSiteProfiles Zinc finger CW-type profile. 580 630 IPR011124 GO:0008270
Mepo2g00838 901 SUPERFAMILY DNA-binding pseudobarrel domain 312 414 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00838 Mepo-Chr2 10557328 10565201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00838 1 852 B3 DNA Binding Superfamily AT4G32010 49.883 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo2g00838 B3 1.4e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00838 K09287 - gmx:100778833 1587.39