Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00836 ATGCAAGATCAATTCATCATCCTATCTTTGTTACTTGTTCTCTTTGGTCCACTCCAAGTGATCTCACAAAACCAACCTTTCAATGAAGATATGCTAGGGTTGATTGTGTTCAAAGCAGGTCTAGAAGATCCGAAAAACAAACTTTCTTCTTGGAACGAAGATGATTATAGTCCTTGCAATTGGGAAGGTGTCAAATGTGATCCTTCAACAAATAGGGTGTCTTCTCTTGTTCTTGATGGATTCTCTCTTTCAGGACATATTGGTAAAAGCCTTATGAGATTGCAGTTCCTTCAAATTCTTTCACTTTCTCGGAACAACTTCACGGGGAGAATAAACCGTGATCTTCTTATTACACTTTGGAATCTAAAAGTTGTTGATTTGAGTGAAAACAATCTCTTTGGAACAATTCCGGATGAACTTTTTAAACAATGTTGGTCTCTTAGAGTTTTATCGTTCGCGAAAAACAATCTCACGGGTACGATTCCTGACTCTTTGAGTTCATGCTACTCGTTAGCAAGTTTGAACTTTTCGTCTAATCAACTAAAAGGTGAATTACATTATGGAATGTGGTTTTTGAAGGAACTTCAATCGCTTGATCTCTCCAATAACTTTCTTGAAGGAGAGATTCCGGAAGGAATTCAAAATCTATATGATTTGAGAGAGTTAAGGCTAGGGAGGAATTTTTTCATCGGTAAGATGCCAGAGAGCATAGGAAACTGTTTGCTTTTGAAGTTGATCGATTTCAGCGATAATCTTCTTACTGATGTAATTCCAGAGTCGATACAAAGACTCGCCTCGTGCACATTACTAAGTTTGCAAGGGAATTATTTCAATGGAAGCATTCCACATTGGATTGGTGAATTGAACAATTTAGAGATATTGAAACTTTCTTCTAATAGATTTTCTGGTCAAATTCCATTTGGCATTGGTGGTCTTAGAAGTTTGCAAGTTTTGAATTTTTCTACAAACAATATTTCGGGTTCTATTCCAGTGAGTATAAGAGAGCTTAAATCTTTGTATATTCTTGATCTAAGTGATAACAAGCTTAATGGAAGCATTCCTTATGAAATAGAAGGAGCAATTTCACTTAGTGAGTTGAGGCTGCAAAGGAATTTCTTAGGTGGAAGAATTCCAGTCCAAATTGGAAAATGTTCAGCATTAACATCTTTGAATCTTGCACACAACAAGCTTATTGGTTCAATCCCTACATCAATTGCAGACCTAGCAAATCTTCAATATGCAGATTTATCATATAATAAACTCTCTGGAACATTACCTAAAAACCTCACAAATCTTACACATCTTTTCTCATTCAATGTTTCCTATAACAATCTTAAAGGTGAATTACCAATTGGTGGATTCTTCAACACAATCACTCCTTCATTTGTTCATGGCAATCCTTTATTATGTGGTTCTGTTGTTAATCACTCATGTGATCAATCTTATCATCCAAAACCTATTGTTTTAAACCCTAATTCAAATTACAACAATTCAAGATCTTCTTTGAAAAACCATCATCATAAGATAATGCTTAGTGTTTCGGTCTTTGTTGCTATCGGTGCAGCTATTTCTATTGTTGTCGGTATTGTTGCTGTTACTGTTTTAAATATTCATGTTAGGTCTTCGATTTCACATTCTGGTGGCGAGGAATTTAGTTTTTCGCCTGAAAAAGATCCGAAATGCGGACAACTTGTCATGTTTAATGGCGATGTTATTGAGTTTGCGGACGAGGCAAATGATCTTCTTAAAGAAGGCAATGAAATCGGCCGTGGTGGATTTGGAATTGTTTATTGTGTTGTATTTCGAGATCGGAATTCTGTATCAATTAAGAAGCTTATAGGTTCAAGTTTGACAAAGTCACAAGAAGATTTTGAGAGCGAGGTTCAAAAGCTTGGAAAAATTAGGCATCAAAATCTTGTGGCAATTGAAGGGTATTATTGGAATCCATCTTTTCAGCTTATTATTTATGAGTACTTTTCTAGAGGAAGTTTGCATAAGCTTCTACATGATGATCAAAGCAAAATTGTGTTTTCTTGGAGGGCAAGATTCAAGGTTATTTTAGGAATTGCAAAAGGGTTGGCCTATTTACATGAAATGGACATAATCCATTATAATATGAAATCAACAAATGTTTTCATTGATCATTGTGATGAGCCTAAAATAGGAGATTTTGGTTTGGTGAATATTTTACCAATGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGTGCACTCGGATACACGGCTCCTGAGTTTGCTTGCCGCACAGTTAACATAACCGAAAAATGCGATGTATATGGTTTTGGAATTTTGATTCTTGAAATTGTGAGTGGGAAAAGACCTGTGGAATATATGGAGGATGATGTTATTGTTCTGTGTGACATGGTGAGGAGTGAATTGGAGGATGGAAAAATTGAGCAATGCATTGATGAGAAGCTCGTTGGTAAATTTTCGCTCGAGGAAGTGACTCCTGTGATTAAATTGGGACTTGTTTGTGCATCACAAGTACCGTCAAATCGTCCAGATATGGCTGAGGTTGTTAACATATTAGAGATGATTCAATGCTCTTCAGAAGGACAACAAGAGGAATTAAAATAA 2601 0.3595 MQDQFIILSLLLVLFGPLQVISQNQPFNEDMLGLIVFKAGLEDPKNKLSSWNEDDYSPCNWEGVKCDPSTNRVSSLVLDGFSLSGHIGKSLMRLQFLQILSLSRNNFTGRINRDLLITLWNLKVVDLSENNLFGTIPDELFKQCWSLRVLSFAKNNLTGTIPDSLSSCYSLASLNFSSNQLKGELHYGMWFLKELQSLDLSNNFLEGEIPEGIQNLYDLRELRLGRNFFIGKMPESIGNCLLLKLIDFSDNLLTDVIPESIQRLASCTLLSLQGNYFNGSIPHWIGELNNLEILKLSSNRFSGQIPFGIGGLRSLQVLNFSTNNISGSIPVSIRELKSLYILDLSDNKLNGSIPYEIEGAISLSELRLQRNFLGGRIPVQIGKCSALTSLNLAHNKLIGSIPTSIADLANLQYADLSYNKLSGTLPKNLTNLTHLFSFNVSYNNLKGELPIGGFFNTITPSFVHGNPLLCGSVVNHSCDQSYHPKPIVLNPNSNYNNSRSSLKNHHHKIMLSVSVFVAIGAAISIVVGIVAVTVLNIHVRSSISHSGGEEFSFSPEKDPKCGQLVMFNGDVIEFADEANDLLKEGNEIGRGGFGIVYCVVFRDRNSVSIKKLIGSSLTKSQEDFESEVQKLGKIRHQNLVAIEGYYWNPSFQLIIYEYFSRGSLHKLLHDDQSKIVFSWRARFKVILGIAKGLAYLHEMDIIHYNMKSTNVFIDHCDEPKIGDFGLVNILPMLDHCVLSSKIQSALGYTAPEFACRTVNITEKCDVYGFGILILEIVSGKRPVEYMEDDVIVLCDMVRSELEDGKIEQCIDEKLVGKFSLEEVTPVIKLGLVCASQVPSNRPDMAEVVNILEMIQCSSEGQQEELK 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00836 866 SUPERFAMILY L domain-like 50 279 - -
Mepo2g00836 866 FunFam Leucine-rich repeat receptor-like protein kinase PXC2 287 481 - -
Mepo2g00836 866 Pfam Protein kinase domain 584 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g00836 866 Gene3D Ribonuclease Inhibitor 187 258 IPR032675 -
Mepo2g00836 866 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 78 851 - -
Mepo2g00836 866 Gene3D Ribonuclease Inhibitor 27 186 IPR032675 -
Mepo2g00836 866 FunFam Leucine-rich repeat receptor-like protein kinase 27 186 - -
Mepo2g00836 866 ProSitePatterns Protein kinases ATP-binding region signature. 588 611 IPR017441 GO:0005524
Mepo2g00836 866 PRINTS Leucine-rich repeat signature 336 349 - -
Mepo2g00836 866 PRINTS Leucine-rich repeat signature 195 208 - -
Mepo2g00836 866 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 659 860 - -
Mepo2g00836 866 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Mepo2g00836 866 Gene3D Phosphorylase Kinase; domain 1 556 658 - -
Mepo2g00836 866 Pfam Leucine Rich Repeat 195 216 IPR001611 GO:0005515
Mepo2g00836 866 SUPERFAMILY L domain-like 219 471 - -
Mepo2g00836 866 ProSiteProfiles Protein kinase domain profile. 582 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g00836 866 SMART LRR_typ_2 336 360 IPR003591 -
Mepo2g00836 866 SMART LRR_typ_2 216 240 IPR003591 -
Mepo2g00836 866 SMART LRR_typ_2 288 312 IPR003591 -
Mepo2g00836 866 SMART LRR_typ_2 432 456 IPR003591 -
Mepo2g00836 866 SMART LRR_typ_2 192 215 IPR003591 -
Mepo2g00836 866 SMART LRR_typ_2 119 143 IPR003591 -
Mepo2g00836 866 Gene3D Ribonuclease Inhibitor 259 481 IPR032675 -
Mepo2g00836 866 Gene3D Transferase(Phosphotransferase) domain 1 659 866 - -
Mepo2g00836 866 Pfam Leucine rich repeat 121 181 IPR001611 GO:0005515
Mepo2g00836 866 Pfam Leucine rich repeat 362 421 IPR001611 GO:0005515
Mepo2g00836 866 Pfam Leucine rich repeat 290 349 IPR001611 GO:0005515
Mepo2g00836 866 FunFam Inactive leucine-rich repeat receptor-like protein kinase 187 283 - -
Mepo2g00836 866 SUPERFAMILY Protein kinase-like (PK-like) 579 856 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00836 Mepo-Chr2 10535586 10538921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00836 11 859 Receptor kinase-like Gene Family AT5G01890 50.313 0.0 864
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Mepo2g00836 Pkinase 7.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00836 - - gmx:100813535 988.023