Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00782 ATGTCCTCTTCATCATCCACTTCCTTTTCACCGGACCAGCAACAACAGCAACAACTCTCTCCTTCGGACCAGCTTTGTTATGTCCATTGCAATTTCTGTGACACTGTTCTCGCGGTGAGTGTTCCTTGCACAAGCTTGTTCAAGACTGTGACAGTAAGATGCGGTCATTGCACCAACCTTCTCTCAGTTAACATGCGTGCTTTGCTCCTTCCTGCTCCTAATCAGCTTCATCTTGGACACACTTACTTCAACCCTCAAACTCTTATGGAGGAGATTCGAAATGTACCTTCAACAAACATGATGATGAATCAGCTTCCAAATCCAAATGATTTGATGATGAACACAATGAGAGGAGGGCATCATGAAGAAATCCCTAAACCTCCACCTGCTAATAGACCTCCGGAGAAGAGACAGAGAGTTCCATCTGCCTACAACCGCTTCATCAAGGATGAGATCCAACGTATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCTTTTAGTGCAGCTGCAAAGAATTGGGCCCACTTTCCACACATTCATTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAATGTTCGTCAGGATTCAGAGGACGTGCTTATGAAAGATGGGTTTTTCACACAAGCAAATGTAGGTGTCTCTCCCTACTAA 666 0.4489 MSSSSSTSFSPDQQQQQQLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRALLLPAPNQLHLGHTYFNPQTLMEEIRNVPSTNMMMNQLPNPNDLMMNTMRGGHHEEIPKPPPANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQDSEDVLMKDGFFTQANVGVSPY 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00782 221 CDD HMG-box_SF 139 175 - -
Mepo2g00782 221 Pfam YABBY protein 21 185 IPR006780 GO:0007275
Mepo2g00782 221 MobiDBLite consensus disorder prediction 117 140 - -
Mepo2g00782 221 FunFam Axial regulator YABBY 130 202 - -
Mepo2g00782 221 SUPERFAMILY HMG-box 130 179 IPR036910 -
Mepo2g00782 221 PANTHER PROTEIN YABBY 6-RELATED 1 197 IPR006780 GO:0007275
Mepo2g00782 221 Gene3D High mobility group box domain 125 182 IPR036910 -
Mepo2g00782 221 MobiDBLite consensus disorder prediction 117 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00782 Mepo-Chr2 9520246 9524027 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00782 32 219 C2C2-YABBY Transcription Factor Family AT4G00180 61.722 2.86e-68 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mepo2g00782 YABBY 1e-73 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00782 K25796 - gmx:100794423 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g00782 2 9520246 9524027 Mepo2g00782 2 9520246 9524027 ECH