Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00774 ATGAATGAAGTTAAACTTTGGTGTAACCAAACCCCTAATCCTCAACCTTGTGTGTATTTCTTGAACAATAACCCTACTTACCAACACAAACTCATCAAACAAAAAGTTGATTTCTTCAAACTTTCATTGGAACTTGTTCAAGAAAGAGCACTCAAAGGCCGTGCAAACACTCTTTCATTAGGCTCCAAATGTAGTAACTCACGTGAAAAATCTGCTTGGGCTGATTGTGTTGAGCTATATGAACAAACCATCCTTAAGCTTAACAAAACCCTAGACACTAAAACAAAGTGTTCTCAAGTTGATGCTCAAACATGGTTAAGCACTGCTCTCACCAACCTTGAGACATGTAAAGCTGGATTCTATGAGCTTGGTGTTCAAGATTATATTCTTCCTCTCATGTCCAACAATGTTACTAAATTACTAAGTAACACTTTGGCTCTTAACAAAGTTCAATATCAAGAACCTAGCTACAAAGATGGGTTCCCAACATGGGTCAGGCCAGGTGATAGAAAGCTATTACAAACTTCATCGTCTCGACCTAACGTAGTAGTAGCAAAAGACGGGTCAGGAAAGTATACAACTGTTGGTGCAGCCGTGAATGCTATACCAAAGAATAACAAAGGTAGGTATGTTATACATGTGAAGGCTGGTGTGTACAATGAACAAGTTGAGATAAAGGCAAAGAATATTATGTTGGTTGGAGATGGTATTGGTAAAACTATAATTACCGGAAGCAAAAGCGTTGGTGGAGGAACCACAACCTTCCGTTCTGCAACTGTTGCTGTTGTTGGAGATGGATTTATGGCTCAAGATATAACATTTAGGAACACTGCCGGTGCAAAAAACCATCAAGCAGTTGCATTGCGTTCCGGATCAGACTTGTCTGTATTTTATAGATGTAGTTTTGAAGGTTTTCAAGACACATTATATGTGCATTCAGATAGACAATTCTACAAACAATGTAACATTTATGGTACGGTTGATTTCATATTTGGCAACGCTGCTGCAGTTTTCCAAAATTGTAACATATTTGCAAGAAACCCTCCAAACAAAGTCAACACAATCACTGCACAAGGTAGAACAGATCCTAACCAAAACACTGGCATTTCTATTCACAATTCTAGGGTTACCGCTGCTTCGGATTTGAAACCGGTCCAAAATTCTGTTAAGACTTATCTTGGTAGACCATGGAAGCAATATTCTAGGGCAGTTTTTATGAAGACTTCTCTTGATAGTTTGATTCATCCAGCTGGTTGGTTAGAATGGAGTGGTAATTTTGCATTAAGTACTTTATATTATGGAGAGTATATGAACACTGGTCTTGGTTCTTCCACAAGAAACCGTGTCAAATGGCAAGGTTATCATGTGATAACAAGTACTTCTGAAGCATCAAAGTTCACTGTATCAAATTTCATTGCTGGAAATGCATGGTTACCTGCAACCAAAGTGCCATTTACATCTACTCTTTAA 1470 0.3823 MNEVKLWCNQTPNPQPCVYFLNNNPTYQHKLIKQKVDFFKLSLELVQERALKGRANTLSLGSKCSNSREKSAWADCVELYEQTILKLNKTLDTKTKCSQVDAQTWLSTALTNLETCKAGFYELGVQDYILPLMSNNVTKLLSNTLALNKVQYQEPSYKDGFPTWVRPGDRKLLQTSSSRPNVVVAKDGSGKYTTVGAAVNAIPKNNKGRYVIHVKAGVYNEQVEIKAKNIMLVGDGIGKTIITGSKSVGGGTTTFRSATVAVVGDGFMAQDITFRNTAGAKNHQAVALRSGSDLSVFYRCSFEGFQDTLYVHSDRQFYKQCNIYGTVDFIFGNAAAVFQNCNIFARNPPNKVNTITAQGRTDPNQNTGISIHNSRVTAASDLKPVQNSVKTYLGRPWKQYSRAVFMKTSLDSLIHPAGWLEWSGNFALSTLYYGEYMNTGLGSSTRNRVKWQGYHVITSTSEASKFTVSNFIAGNAWLPATKVPFTSTL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00774 489 ProSitePatterns Pectinesterase signature 2. 323 332 IPR033131 -
Mepo2g00774 489 Pfam Pectinesterase 181 475 IPR000070 GO:0030599|GO:0042545
Mepo2g00774 489 FunFam Pectinesterase 175 489 - -
Mepo2g00774 489 PANTHER PECTINESTERASE 4 481 - -
Mepo2g00774 489 SMART PMEI_2 1 147 IPR006501 GO:0004857
Mepo2g00774 489 SUPERFAMILY Pectin lyase-like 176 488 IPR011050 -
Mepo2g00774 489 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 150 IPR035513 -
Mepo2g00774 489 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 3 150 IPR035513 -
Mepo2g00774 489 CDD PMEI-like_3 6 149 - -
Mepo2g00774 489 ProSitePatterns Pectinesterase signature 1. 206 225 IPR018040 -
Mepo2g00774 489 SMART complete 214 392 IPR006633 -
Mepo2g00774 489 NCBIfam pectinesterase inhibitor domain 2 149 IPR006501 GO:0004857
Mepo2g00774 489 Pfam Plant invertase/pectin methylesterase inhibitor 3 147 IPR006501 GO:0004857
Mepo2g00774 489 Gene3D - 175 489 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00774 Mepo-Chr2 9381766 9383686 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00774 3 489 Carbohydrate Esterase AT2G45220 67.418 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00774 K01051 - gmx:100783964 853.973