Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00661 ATGGCCCTTTTCACTGATAATCCATCATTCCCAGCCGGTCTCAAGGTTATTGCAATTGATCATGACATCACTTTCCTCAACTCTATTGAGGAGATGTGTAATCGATATCATTATCAAGTTACCAAATGCAATTCAGCTTCTGATGCCTTGAACTTGTTGGAAAGAAAGGACTGTTTTGATGTAATGTTGATTGATGCTCATATGCCAAACATGGATGCTTATAACTTTGTTCAACATGCAACCCTACAACTCAACATTCCTGTCATTATGATGGCTGTTGATTTCACAAAAAGTTCTATTATCAAGTCTATTCAATGTGGGGCTTGCACATATTGGACTAAGCCTTTGGTTGAAGAAGAGATCAAAATCATGTGGCAACATGTTGTAAGAAACGGTTTGACTGAAAATAAAGAACATGAAATTGTTGGAAGCTTGGTGGTTCAAGAAAATAGAAAACCGGGTAGAGAAGATGCTAACACCTCAAAAGAAACACGTGCAAAGAAGGTCCGTTTGTCTTGGTCGCCAGAACTGCATCAGCGGTTTCTATATGCTGTCAATCAACTAGGCCTTGATAGGGCAACGCCAAAAAAGATTCAGAAAATCATGGATGTTCCTGATATTACAAAACAACATGTTGCTAGCCATTTACAGAAGTATAGAAATTATTTAAAGAGCTCAACTGAAGATACAAAAGGTAGGATGAAAAAATCAAAGACGAGTCCTCTTGAAACGAAATTTAGCTTAGAACCTCCTCACTCCCTTCCGGAGCAGGACCAGAGTTTTCTCGTGAATTCAACCACACAATGTCGCGACAATTGTGACGCACAACAACATTGGATGGAAATTGGTGAATCTGACATTACTAGCAACATTTTTTCAGACTTGCCCAACTTGTTCCCATATGTTGATGATGATTTATCATCACTTGTGTGGTGA 936 0.3878 MALFTDNPSFPAGLKVIAIDHDITFLNSIEEMCNRYHYQVTKCNSASDALNLLERKDCFDVMLIDAHMPNMDAYNFVQHATLQLNIPVIMMAVDFTKSSIIKSIQCGACTYWTKPLVEEEIKIMWQHVVRNGLTENKEHEIVGSLVVQENRKPGREDANTSKETRAKKVRLSWSPELHQRFLYAVNQLGLDRATPKKIQKIMDVPDITKQHVASHLQKYRNYLKSSTEDTKGRMKKSKTSPLETKFSLEPPHSLPEQDQSFLVNSTTQCRDNCDAQQHWMEIGESDITSNIFSDLPNLFPYVDDDLSSLVW 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00661 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 165 224 IPR017930 -
Mepo2g00661 311 Gene3D - 164 225 - -
Mepo2g00661 311 ProSiteProfiles Response regulatory domain profile. 15 129 IPR001789 GO:0000160
Mepo2g00661 311 MobiDBLite consensus disorder prediction 225 256 - -
Mepo2g00661 311 SMART REC_2 14 125 IPR001789 GO:0000160
Mepo2g00661 311 Pfam Response regulator receiver domain 16 122 IPR001789 GO:0000160
Mepo2g00661 311 SUPERFAMILY Homeodomain-like 166 225 IPR009057 -
Mepo2g00661 311 CDD REC_typeB_ARR-like 16 129 - -
Mepo2g00661 311 Gene3D - 14 142 - -
Mepo2g00661 311 FunFam Two-component response regulator 164 226 - -
Mepo2g00661 311 MobiDBLite consensus disorder prediction 225 242 - -
Mepo2g00661 311 SUPERFAMILY CheY-like 13 148 IPR011006 -
Mepo2g00661 311 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 241 IPR045279 GO:0009736
Mepo2g00661 311 NCBIfam myb-like DNA-binding domain, SHAQKYF class 168 221 IPR006447 GO:0003677
Mepo2g00661 311 Pfam Myb-like DNA-binding domain 171 220 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00661 Mepo-Chr2 7950671 7952238 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00661 10 224 Response Regulator Gene Family AT2G25180 37.657 8.50e-47 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mepo2g00661 Response_reg 4.2e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00661 - K14491 mtr:25491583 525.013