Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00654 ATGGCCCTTTTCATTGACAACCCATCATTCCCTGCTGGTCTCAAGGTTATTGCCATTGATCATGCCATCACTGTTCTTAACACTGTTGAGGATATGTGTAATCGATTCCATTATCAAGTTACCAAATGTAACACAGCTTCTGATGCCTTGAATTTGTTGGAAAGAAAGGACTGTTTCGATGTAATGTTGATTGATGCTCATATGCCAAACATGGATGTTTATGACTTCGTCCAAAATGTTACCCTACAACTCAACATTCCTGTCATCAAAGCAAGACCCAAAATGATTCTCAAAATTATGGATGTTCCTGATTTGAGAGTAGGACATGTTGCTAGTCATTTACAGAAATATAGGATTCACTTGAAGAGACCGGCTGATGAAACAAAACGTGGGAGGAAAAACTCAAAGTGGAGTGATAGCTTTCAAGACGATTGGATTGACAAGGTTCACAGTCATGACTTTCAAACCGAGTCGATCGATCCGGACCGGAATGATAACCTTCAAACTGAGCTGACCGATCAAGACCGGAATGACGACTTTCTAGCTGAGTGGATTGACTGCGGGACGGGATCCTACCTTCACAACCTTATGGCCTCGATGCTGTTTAATTAA 612 0.415 MALFIDNPSFPAGLKVIAIDHAITVLNTVEDMCNRFHYQVTKCNTASDALNLLERKDCFDVMLIDAHMPNMDVYDFVQNVTLQLNIPVIKARPKMILKIMDVPDLRVGHVASHLQKYRIHLKRPADETKRGRKNSKWSDSFQDDWIDKVHSHDFQTESIDPDRNDNLQTELTDQDRNDDFLAEWIDCGTGSYLHNLMASMLFN 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00654 203 Gene3D - 72 123 - -
Mepo2g00654 203 NCBIfam myb-like DNA-binding domain, SHAQKYF class 90 120 IPR006447 GO:0003677
Mepo2g00654 203 Gene3D - 9 71 - -
Mepo2g00654 203 ProSiteProfiles Response regulatory domain profile. 15 172 IPR001789 GO:0000160
Mepo2g00654 203 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 89 IPR045279 GO:0009736
Mepo2g00654 203 SUPERFAMILY CheY-like 13 89 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00654 Mepo-Chr2 7872776 7874116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00654 10 89 Response Regulator Gene Family AT4G16110 43.210 2.18e-15 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo2g00654 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00654 - K14491 mtr:25491583 144.821