Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00653 ATGGCCCTTTACAGCGACAAAACATCATTCCTAGAAGGTCTCAAGGTTCTTGCAATTGATCATGACATCACTCTCCTTAATTCCATTGAGGAGATGTGTAATCGATGCAATTATAAGGTAACCAAATGTAGCATGGCTTCTGATGCCTTCAACATGTTGGAAAGAAAGGACTGTTTCGATGTAATGTTGATTGATGCTCATATGCCAAACATGGATGCTTATGACTTTGTCCAAAGTGTTGCCCTACAACTCAACATTCCTGTCATTAGGGCAATGCCAAAAAAGATTCTGAAAATCATGGATATTCCCAATATGACAAAAGAACAGGTTGCCAGCCATTTACAGAAGTATAGAAATCAGTTAAAGAGTTCAACCGAAGAGACAAAAGGTAGGATGAAAAAATCAAAGACGAGTCCTCTTGAAACGAAATTTAACTTAGAAGCTACTCACTCAATGCCGGAGCAGGACCAGAGTTTTCTCCTGAATTCTGCAACACAATGTCGCGACAATTGCAATGCACAACAACATTGGGTGGAAATTGGTGAATCCAACATTATGAGCAACACTTTTTCTGACTTTCCCAACTTGATCCCATATGTTGATGATGATTTATCATCACTTGTGTGGTGA 630 0.3921 MALYSDKTSFLEGLKVLAIDHDITLLNSIEEMCNRCNYKVTKCSMASDAFNMLERKDCFDVMLIDAHMPNMDAYDFVQSVALQLNIPVIRAMPKKILKIMDIPNMTKEQVASHLQKYRNQLKSSTEETKGRMKKSKTSPLETKFNLEATHSMPEQDQSFLLNSATQCRDNCNAQQHWVEIGESNIMSNTFSDFPNLIPYVDDDLSSLVW 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00653 209 ProSiteProfiles Response regulatory domain profile. 15 136 IPR001789 GO:0000160
Mepo2g00653 209 Coils Coil 107 127 - -
Mepo2g00653 209 SUPERFAMILY CheY-like 12 89 IPR011006 -
Mepo2g00653 209 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 89 IPR045279 GO:0009736
Mepo2g00653 209 Gene3D - 72 123 - -
Mepo2g00653 209 MobiDBLite consensus disorder prediction 121 140 - -
Mepo2g00653 209 NCBIfam myb-like DNA-binding domain, SHAQKYF class 90 120 IPR006447 GO:0003677
Mepo2g00653 209 SUPERFAMILY Homeodomain-like 90 123 IPR009057 -
Mepo2g00653 209 Gene3D - 6 71 - -
Mepo2g00653 209 Pfam Response regulator receiver domain 16 89 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00653 Mepo-Chr2 7837169 7838730 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00653 2 89 Response Regulator Gene Family AT4G16110 39.326 5.95e-16 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo2g00653 Response_reg 3.3e-07 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00653 - K14491 mtr:25491583 223.402