Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00605 ATGGCAAATAGACTTCTGTTTGACGACAGCACTGAAATTGGATTTTTTTGTAAACTCACCAATGCCTATTGCTTGGTTGGCCCTGGAGGTTCCAATAACTTCTACAGTGCAATTGAGGCTGAACTAGAAGATGTGATCCCTATCATCAAAACCTCCGTTGGTGGCTGTTCTGGTGTTGGTCGTTTTTGTATTGGAAACAAAAATGGGCTTCTCTTGCCCTATACAACCACACTCGAAGAATTGCAGAATATAAAAAGAAGTCTGCCTGATGGAGTTGCTGTTCAGCTCATGCAAAAAGAAATGTGTGCTTCTTCAAGATTTATAGCATGTAATGACTATGTGGCCCTTGCGCACGCCGATCTTCACTGGGATGCTAAGGAGTTAATCACAGATGTCCTTGGGATAGAAGTTTTCAAGCCGGAAGATTATTATAGTTTATTTTCTGGAAGTTACTGTGCCTTATCCAACATAGGTGGTTTGATCCACCCTTATGCTTCCAAAGAAGGCTTGGATGAACTTTCTGCAGCTCTTGAAGTTCCTTTGGAACCTGGGACCGTCAACCGAGGCAGCCAAGCTATAGCTCCTGGCATGACCGTAAATGATTGGACAGCCTTTTGTGGTTCAAGCACCACAAGAGCAGAGCTCTGTGTGATTGATAGAGTTTTCAAGCTGAGGGAACCCGCCTTGCCATTATGA 696 0.4382 MANRLLFDDSTEIGFFCKLTNAYCLVGPGGSNNFYSAIEAELEDVIPIIKTSVGGCSGVGRFCIGNKNGLLLPYTTTLEELQNIKRSLPDGVAVQLMQKEMCASSRFIACNDYVALAHADLHWDAKELITDVLGIEVFKPEDYYSLFSGSYCALSNIGGLIHPYASKEGLDELSAALEVPLEPGTVNRGSQAIAPGMTVNDWTAFCGSSTTRAELCVIDRVFKLREPALPL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00605 231 SMART eIF6neu2 3 204 IPR002769 GO:0042256|GO:0043022
Mepo2g00605 231 Hamap Translation initiation factor 6 [eif6]. 1 231 IPR002769 GO:0042256|GO:0043022
Mepo2g00605 231 SUPERFAMILY Pentein 1 224 - -
Mepo2g00605 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 226 IPR002769 GO:0042256|GO:0043022
Mepo2g00605 231 CDD IF6 4 223 IPR002769 GO:0042256|GO:0043022
Mepo2g00605 231 Gene3D - 1 225 - -
Mepo2g00605 231 PIRSF Transl_init_IF-6 1 226 IPR002769 GO:0042256|GO:0043022
Mepo2g00605 231 Pfam eIF-6 family 5 203 IPR002769 GO:0042256|GO:0043022
Mepo2g00605 231 NCBIfam translation initiation factor IF-6 5 223 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00605 Mepo-Chr2 7110909 7114112 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00605 1 226 Eukaryotic Initiation Factors Gene Family AT3G55620 61.947 2.68e-102 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00605 K03264 - pda:103709397 284.263