Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00560 ATGGCTAGTGATGAGGGTTTTGAAGGTTACCATGTCCCACAACAAAGTAGAAGAGATAAGCTTAGAGTTGTTGTGGCTCAAAATCAACAACCTCATGAACCTTTACTTCCTTTCTATGATTCTTCTTCTTTCATTACTAATTTTACTAACCAACAAGGTTTGAAACATAATTCATGTTCTTCTTCTAATTCTATCAAGGATTTAGAGTGTTCTAATTTGATGATGCGTTTTTCAAGAGAAGATCAAGGAAAAAGGGTCATGAATATGAATATTTCTTCTTCTAACAACTCTTGTTCAGTTTCTCATCATCCTTATTTTGAGACTTTGAATAACAACAATCAAGGAAATAATAATAACCCTTTTCTTTATCAACCACAAAACATTCAAAATCTTAGACAATTTGATGAACAACATAGTAGTACTAGTACTATGATGTTGAATAATCATGAACCTTTGTCTTTGTCACTTTCATCAAATAAAAGTGTTAGTAGTAATTTACCTTTAGAGTTGAATCTACAAAGATATGGATCTATGATTTATGGTGGTGGAGGTGTGATTCAAGGGTTGGTTGAAGGAGGAGGAGGAAGTGGTGGTTCAGTTCCATTTACTGGATATGCTTCTGTTTTGAAGGATTCTAGGTTTTTGAAACCAGCTCAAGAATTGTTGGAAGAGATGTGTGATGTTGGAAATCTTGGTATTTGTGGTGAGAAGGTTGTTGTTGTTGCTGATTCTTCTTTGATGATGGAATCTCCTTTGGAAAGATTGAGTGAAGAAGATCCATTTGGTGATGGTCGCAATAAATCAAGATTGTTGACTATGCTTGATGAGGTTTACAAGCGGTACAGGCAATACTACCAACAGATGCAATCGGTCGTAACATCATTTGAGTATGTTTCCGGCCTCAACAATGCAGCTCCTTATGCAAGTTTGGCGATAAAAGCTATGTCCAAACATTTTAGATGCTTGAAGAAGGCAATTACTGACCAACTTCAGTTCAATAATAAGGCTCATTTTCACACAAGCAATCGGAAGGAAGAATCTCCTAGATTTGGCAATAGTGAAAGAGGAGGACCTTACAGCCATAGGTCAGGTTATCTTGAGCAGCAACAACCTGTATGGCGACCTCAAAGAGGACTCCCCGAGCGTGCTGTGACTGTTCTTAGAGCTTGGCTCTTTGAACACTTTCTGCATCCCTATCCTACTGATACAGACAAAATAATGTTGGCCAAACAAACCGGTCTATCGCGTAGCCAGGTGTCAAATTGGTTCATAAATGCAAGAGTAAGGCTTTGGAAACCAATGGTGGAAGAAATTCACATGCTAGAAACAAGGCAAACTCCAAAAGATTCACAACAAAAGGAAGAAAATTGTAGGAACAAATCAAGTGATCATCATCATTTGCCTTCAGATACTTCTCTAGTTTCCGAGAATCCATCTACATCGACAGATAAGTTTCATGACGCCACTTACAAGCGTGCCGTAAATGAAATTCCTAACATACCAATTAGGAGTCAAGGACAACATCAACAACAAATGAGTCTACCTTTTCAACATGTAGGTGTTGGAATGAACATTGTTGGTAGTGGAAGCAATAATAGCAATCATAGTAATAATAATAATAATAGTAATGTGTCATTGACACTAGGACTTTATCAAAATCATGGGATTGGTTTAGCTGAACCATTTCCATTAAGTGCAGCTCAACGATTTGGTCTTGGCCTTGAAACCAATAATGAAGGTAATTATGTTATGAGTGGTTTTGAATCACAAAATAGGCATTTTGGAAGAGATGTAATTGGTGGGCAAATGTTTCATGACTTTGTAGGATGA 1830 0.371 MASDEGFEGYHVPQQSRRDKLRVVVAQNQQPHEPLLPFYDSSSFITNFTNQQGLKHNSCSSSNSIKDLECSNLMMRFSREDQGKRVMNMNISSSNNSCSVSHHPYFETLNNNNQGNNNNPFLYQPQNIQNLRQFDEQHSSTSTMMLNNHEPLSLSLSSNKSVSSNLPLELNLQRYGSMIYGGGGVIQGLVEGGGGSGGSVPFTGYASVLKDSRFLKPAQELLEEMCDVGNLGICGEKVVVVADSSLMMESPLERLSEEDPFGDGRNKSRLLTMLDEVYKRYRQYYQQMQSVVTSFEYVSGLNNAAPYASLAIKAMSKHFRCLKKAITDQLQFNNKAHFHTSNRKEESPRFGNSERGGPYSHRSGYLEQQQPVWRPQRGLPERAVTVLRAWLFEHFLHPYPTDTDKIMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIHMLETRQTPKDSQQKEENCRNKSSDHHHLPSDTSLVSENPSTSTDKFHDATYKRAVNEIPNIPIRSQGQHQQQMSLPFQHVGVGMNIVGSGSNNSNHSNNNNNSNVSLTLGLYQNHGIGLAEPFPLSAAQRFGLGLETNNEGNYVMSGFESQNRHFGRDVIGGQMFHDFVG 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00560 609 Pfam Associated with HOX 208 327 IPR006563 -
Mepo2g00560 609 MobiDBLite consensus disorder prediction 442 470 - -
Mepo2g00560 609 SMART HOX_1 373 437 IPR001356 GO:0003677
Mepo2g00560 609 Gene3D - 376 438 - -
Mepo2g00560 609 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 115 456 - -
Mepo2g00560 609 SMART prehox3 203 328 IPR006563 -
Mepo2g00560 609 FunFam BEL1-like homeodomain protein 9 376 438 - -
Mepo2g00560 609 MobiDBLite consensus disorder prediction 337 363 - -
Mepo2g00560 609 SUPERFAMILY Homeodomain-like 375 440 IPR009057 -
Mepo2g00560 609 CDD homeodomain 373 434 IPR001356 GO:0003677
Mepo2g00560 609 ProSiteProfiles 'Homeobox' domain profile. 370 433 IPR001356 GO:0003677
Mepo2g00560 609 Pfam Homeobox KN domain 390 429 IPR008422 GO:0003677|GO:0006355
Mepo2g00560 609 MobiDBLite consensus disorder prediction 442 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00560 Mepo-Chr2 6632871 6638519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00560 140 609 Homeobox Transcription Factor Family AT5G02030 47.658 6.04e-116 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mepo2g00560 POX 7.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00560 - - cam:101498314 849.736