Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00558 ATGGCGGCGCAAACGACGGGAAGGAGTAGTAGTAGCAGTAGGATTGTAGGAGATTATGTAGTTGGGAAGCAAATTGGAGCGGGTTCGTTTTCAGTTGTGTGGCATGCGAGACACAAAGTTCATGGAACTGAAGTTGCTATCAAAGAGATCGCTACGTTAAGATTGAATAAGAAGTTGCAAGAGAGTCTCATGTCTGAGATTTTTATTCTTAAGAGGATTAATCATCCTAATATCATTTCTTTGCATGATATCATTCAGGCTCCTGGGAAGATACATCTTGTGTTAGAATACTGTAAAGGGGGAGATCTTTCATTGTACATTCAACGCCATGGAAGGGTACCGGAGGCAACTGCAAAACATTTTATGCTTCAGCTGGCTGCTGGCCTACAAGTTCTTCGGGATAATAACCTTATTCATCGAGATTTGAAACCACAGAATCTTCTTCTCTCCAGAAATGATGAGAAGGCAGTTCTGAAGATCGCTGACTTTGGATTTGCAAGATCTCTGCAACCGAGGGGCCTTGCAGAAACATTATGTGGTTCACCACTCTACATGGCTCCAGAAATCATGCAACTGCAGAAATATGATGCGAAGGCAGATCTCTGGAGTGTTGGAGCAATCTTATATCAGTTTGTTACAGGGAAAACACCTTTTACTGGAAACAATCAAATACAGTTACTACAGAATATTGTGAATTCAACAGAATTGCAATTTCCACCGGATAGCCCAAGTTTAAGTTCTGAGTGCAAAGATTTGTGTCAGAAATTACTACGCCGTAATCCAGTGGAACGTCTAACTTTTGAAGAATTCTTTAACCACCCATTCCTTAATCCACAGCAAACAAAACAGGATGAACCATTATTAAGGAATAAAAGCTCTCCAAGGCCGATAAGTGAGTTCTGTTCACCAGTGACTGACCCTATGAGAAGAACCGAGGAAAATTATCAAGAGGATTGCTTACCTTTCATTCTAGATGATGATTCCAGTAGACCTGCAGGGAATACATTGTTTTCAAAGAAGAAGTCCTCAATAAAGTCTACCTTTGGATTTGATCTAAATACAAAACTAGATAAAGCAGAGTCAACTTCTATTTCTAATAATGTAAATTCTGCTTCCAGATATAGTAGTGTAACACAGAGACTTGAAAATACTTTTAAAAGATTGGACAACCATAAAATTTCAGGAAGAAATCTCACTAGTTCTGTAGAATCTCCAGAACAGATATTTGCAAATCCTTATCCTAGAGGTATCAATACCAAACTGAAGTTTCTTTTTTCCATTTCTGTTTTTCATGGTAAGATTTAA 1305 0.3862 MAAQTTGRSSSSSRIVGDYVVGKQIGAGSFSVVWHARHKVHGTEVAIKEIATLRLNKKLQESLMSEIFILKRINHPNIISLHDIIQAPGKIHLVLEYCKGGDLSLYIQRHGRVPEATAKHFMLQLAAGLQVLRDNNLIHRDLKPQNLLLSRNDEKAVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILYQFVTGKTPFTGNNQIQLLQNIVNSTELQFPPDSPSLSSECKDLCQKLLRRNPVERLTFEEFFNHPFLNPQQTKQDEPLLRNKSSPRPISEFCSPVTDPMRRTEENYQEDCLPFILDDDSSRPAGNTLFSKKKSSIKSTFGFDLNTKLDKAESTSISNNVNSASRYSSVTQRLENTFKRLDNHKISGRNLTSSVESPEQIFANPYPRGINTKLKFLFSISVFHGKI 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00558 434 FunFam Non-specific serine/threonine protein kinase 3 99 - -
Mepo2g00558 434 Pfam Protein kinase domain 19 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g00558 434 Gene3D Transferase(Phosphotransferase) domain 1 9 343 - -
Mepo2g00558 434 FunFam Serine/threonine-protein kinase ATG1 11 318 - -
Mepo2g00558 434 ProSiteProfiles Protein kinase domain profile. 19 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g00558 434 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Mepo2g00558 434 SMART serkin_6 19 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g00558 434 MobiDBLite consensus disorder prediction 278 305 - -
Mepo2g00558 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Mepo2g00558 434 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 8 378 IPR045269 GO:0004674|GO:0006914
Mepo2g00558 434 CDD STKc_ATG1_ULK_like 25 275 - -
Mepo2g00558 434 SUPERFAMILY Protein kinase-like (PK-like) 14 297 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00558 Mepo-Chr2 6597317 6601696 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00558 5 283 CBL-interacting serine-threonine protein kinases AT2G30360 35.439 1.33e-54 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Mepo2g00558 Pkinase 2.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00558 K08269 - gmx:100791596 681.019