Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00557 ATGGAACCTGAACAACAACCACCAACCCTCACGGCGGTGCACGACGGAAGCGGCGACGAAGGTTTAGCCGCATTAGGCGAAGGCGGCGAAGGAAGTAGTGGTAGCAAAGTGAAAGGACCTTGGTCTCCTGAAGAAGACGCCATTCTCAGTCGTCTTGTTAGTCAGTTCGGTGCTAGAAACTGGAGTTTGATTGCTCGTGGGATTTCTGGAAGATCGGGGAAGTCGTGCCGGCTCCGGTGGTGTAATCAGCTTGACCCTTCTGTTAAACGGAAACCCTTCACTGATGAGGAAGACCGGATCATAGTTGCTGCTCATGCAATCCATGGAAACAAATGGGCAGCCATTGCTAGGCTTCTACCAGGAAGAACAGATAATGCCATTAAGAACCACTGGAATTCTACTCTGAGGCGTCGGGGAATTGGGGGAGTTGAACATGATAATACTAAGTTAGAATCTGGTAACATGGGGGGAAATATTAGCTTGGAGAAAGCCAAAGCATCATCTGAAGAAACTCTATCATGTGGAGATGTTAATTCTTTGAAATCCTCAGAAGGAAGAGATGTTAGTTCTATGGAGATTGTGGATGATAAAAATGAAGACAAAGCAAGGACTGATGTTCAATTATACCATGAAGTCAGGGATCCACCGACCCTTTTCAAGCCAGTAGCACGTGTAAGTGCTTTTAATGCGTATAATGCTTTCAATGGTTCACAACCTTCAACATCAACTCCAAGACCTGTTCCAATGCAAGGACCTATTTTACATTCACCAAAATCAGATGTGGAAATTTGTAAAATGCTTAACAGAACTATTATCGACCGGTCAGTGCCTAATCAGTGTGGTCATGGATGCTGTTCATCTCTTGGTAACAACTCCAAAAGCTCTTTGCTGGGACCAGAATTCATTGAATATTCAGAACCTCAATCTTTCACAAGTTTTGAGTTGGCTGCAATAGCTACAGACATTAGCAACCTTGCTTGGCTTAAAAGTGGATTGGAGAACAGTAGTGTGAAAATGATGGGTGATACTGCTGGCAGGGTTAATATCTAA 1050 0.4419 MEPEQQPPTLTAVHDGSGDEGLAALGEGGEGSSGSKVKGPWSPEEDAILSRLVSQFGARNWSLIARGISGRSGKSCRLRWCNQLDPSVKRKPFTDEEDRIIVAAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGIGGVEHDNTKLESGNMGGNISLEKAKASSEETLSCGDVNSLKSSEGRDVSSMEIVDDKNEDKARTDVQLYHEVRDPPTLFKPVARVSAFNAYNAFNGSQPSTSTPRPVPMQGPILHSPKSDVEICKMLNRTIIDRSVPNQCGHGCCSSLGNNSKSSLLGPEFIEYSEPQSFTSFELAAIATDISNLAWLKSGLENSSVKMMGDTAGRVNI 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00557 349 FunFam Transcription factor MYB44 92 138 - -
Mepo2g00557 349 SUPERFAMILY Homeodomain-like 36 131 IPR009057 -
Mepo2g00557 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 139 IPR017930 -
Mepo2g00557 349 Pfam Myb-like DNA-binding domain 41 98 - -
Mepo2g00557 349 FunFam MYB transcription factor 38 89 - -
Mepo2g00557 349 ProSiteProfiles Myb-like domain profile. 85 135 IPR001005 -
Mepo2g00557 349 ProSiteProfiles Myb-like domain profile. 33 84 IPR001005 -
Mepo2g00557 349 MobiDBLite consensus disorder prediction 1 41 - -
Mepo2g00557 349 Gene3D - 37 89 - -
Mepo2g00557 349 SMART sant 37 86 IPR001005 -
Mepo2g00557 349 SMART sant 89 137 IPR001005 -
Mepo2g00557 349 PANTHER MYB PROTEIN-RELATED 38 192 - -
Mepo2g00557 349 CDD SANT 92 135 IPR001005 -
Mepo2g00557 349 Gene3D - 92 138 - -
Mepo2g00557 349 CDD SANT 40 82 IPR001005 -
Mepo2g00557 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 84 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00557 Mepo-Chr2 6574403 6580205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00557 25 347 MYB Transcription Factor Family AT3G09230 49.850 1.90e-99 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo2g00557 Myb_DNA-bind_6 2.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00557 K09422 - gmx:100811740 486.878