Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00523 ATGGCAGCGACGCTAGGATGGTCGGAGACAGCGGCGGCGGGTTGGTTAGTGTTGGTAGCGGGATGGTGGGGTTCGCTCACAATGCTGACGGAGACCAAGAGAGAGGTGCAGTGGCGAGAGAGAGAGGGAGAGATGACGGCGGAGCCGGTGGGAAGGAGAGGTGGCTTCGATGATTATGGGGGAGGAAGGTGGAAAAACCGTCATGCTACGGTTGAGGTTGTTCCATCTGCAGGGGCGTTGGTTATCAAGGCTTTGAAGGAACCTGAATGTGACCGGAAGAAGAACAAGAATATTAAGCACGTTGGAAGCATTTCGTTTGATGATGTGATCGAGATCATGAGAATTATGAAGACGAGATCAATGGCGAAGGAGCTTGCTGGAGCTGTGAAGGAGATTCTGGGGACGTGTCGCTCCGTTGGATGCACTATTGATGGAAAGGATCCAAAAGATTTGCAGCAAAAGATCAATGGTGGAGTTATTGAAATCCCTCAGTACTGA 498 0.512 MAATLGWSETAAAGWLVLVAGWWGSLTMLTETKREVQWREREGEMTAEPVGRRGGFDDYGGGRWKNRHATVEVVPSAGALVIKALKEPECDRKKNKNIKHVGSISFDDVIEIMRIMKTRSMAKELAGAVKEILGTCRSVGCTIDGKDPKDLQQKINGGVIEIPQY 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00523 165 Gene3D - 76 163 IPR036769 -
Mepo2g00523 165 PANTHER 60S RIBOSOMAL PROTEIN L12 65 150 IPR000911 GO:0003735|GO:0005840|GO:0006412
Mepo2g00523 165 SUPERFAMILY Ribosomal protein L11, C-terminal domain 75 148 IPR036769 -
Mepo2g00523 165 FunFam 60S ribosomal protein L12 81 163 - -
Mepo2g00523 165 SMART rl11c 36 144 IPR000911 GO:0003735|GO:0005840|GO:0006412
Mepo2g00523 165 ProSitePatterns Ribosomal protein L11 signature. 130 145 IPR020785 GO:0003735|GO:0005840|GO:0006412
Mepo2g00523 165 Pfam Ribosomal protein L11, RNA binding domain 74 143 IPR020783 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00523 Mepo-Chr2 6237907 6242180 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00523 65 164 Cytoplasmic Ribosomal Protein Gene Family AT5G60670 76.000 1.82e-49 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00523 K02870 - egt:105952590 155.606