Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00463 ATGGTTTCATTTAGGTATGAGCTCGGTCGCCAGTCAGCTAACACCAAGCTATCAAGCAACAAAACACTTAGGACGATTCGTGTTAGAGGTGGCAATGTGAAATGTAGAGCTCTGAGATTGGATACAGGAAACTGTTCATGGGGGAATGAAGCTGTCACTCGAAAAACCCGTTTGCTAAATGTGGTTTACAATGCTTCCAACAATGAGCTTGTGCGAACTCAGACTCTTGTAAAGAGTGCTATTGTGCAGGTTGATGCCGCTCGATTCAAGCAGTGGTACCTTCAACCTTATGGTGCTGACATTGGTAGGACAAAGAAAACTGCTGGCAAGAAAGACTCTGCAGAGGTGATATGTTACTGA 360 0.4444 MVSFRYELGRQSANTKLSSNKTLRTIRVRGGNVKCRALRLDTGNCSWGNEAVTRKTRLLNVVYNASNNELVRTQTLVKSAIVQVDAARFKQWYLQPYGADIGRTKKTAGKKDSAEVICY 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00463 119 FunFam 40S ribosomal protein S8 11 117 - -
Mepo2g00463 119 Pfam Ribosomal protein S8e 6 90 IPR022309 -
Mepo2g00463 119 CDD Ribosomal_S8e_like 5 103 - -
Mepo2g00463 119 Gene3D - 11 116 - -
Mepo2g00463 119 NCBIfam ribosomal protein eS8 5 88 IPR001047 GO:0003735|GO:0005840|GO:0006412
Mepo2g00463 119 PANTHER 40S RIBOSOMAL PROTEIN S8 5 112 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00463 Mepo-Chr2 5536591 5536950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00463 5 106 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.294 7.17e-57 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00463 K02995 - pcin:129288318 191.045