Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00440 ATGGTGATGGGAGAGATGCGCAAGTCTTTTAAGGATTCTCTTAAAGCTCTTGAAGCTGATATTCAATTTGCCAATACACTAGCTTCTGATTATCCAAGTGAAACTGATGGAGCCCGCTTTCAAATGAGATTATCTTATAGCCCAGCTGCTCAATTTCTCCTTTTTATGTTTAAGTGGACTGATTGCCATCTTGCCGGAGCATTAGGATTGCTTAGAGTTCTCGTATACAAGACATTTGAGGATGGGAAGACAACCATGTCCGTATATGAAAGAAAAGCCAGTCTAAAGGAGTTCTATGGTGTGATATTTCCCTCTTTATTACAACTTCAGAGAGGAATCACTGATGTAGAAGAGAGGAAACAGAAAGATTTGTGTGCTACAAAATACAAGCCTAAAAATGTGATCGGAAAAGGAAAGCTATCTGAAATTGATTTAGAGAGAGAAGAAGAATGTCCGATTTGTATGGAGATGAACAACAAGGTTGTGTTACCCAATTGCTACCATTCTTTGTGTATGAAATGCTATAATGACTGGCATACAAGATCTCAATCTTGCCCTTTTTGCCGCGACAGTCTTAAAAGAGTAAACTCTGGTGACCTTTGGATCTACATGAGCAACAGTGAGATATATGATTTGGAATCAATCAACAAGGAGAATTTAAGAAGGCTATTTATGTACACTGACAAGTTGCCTCTGATTTCACCGGATCGAATATTAATCTCTTGTCATCAAGACTTCTGA 741 0.3833 MVMGEMRKSFKDSLKALEADIQFANTLASDYPSETDGARFQMRLSYSPAAQFLLFMFKWTDCHLAGALGLLRVLVYKTFEDGKTTMSVYERKASLKEFYGVIFPSLLQLQRGITDVEERKQKDLCATKYKPKNVIGKGKLSEIDLEREEECPICMEMNNKVVLPNCYHSLCMKCYNDWHTRSQSCPFCRDSLKRVNSGDLWIYMSNSEIYDLESINKENLRRLFMYTDKLPLISPDRILISCHQDF 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00440 246 SUPERFAMILY RING/U-box 140 194 - -
Mepo2g00440 246 ProSitePatterns Zinc finger RING-type signature. 166 175 IPR017907 -
Mepo2g00440 246 PANTHER RING FINGER PROTEIN 41, 151 8 241 - -
Mepo2g00440 246 ProSiteProfiles Zinc finger RING-type profile. 151 189 IPR001841 -
Mepo2g00440 246 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 138 198 IPR013083 -
Mepo2g00440 246 FunFam RING/U-box superfamily protein 132 198 - -
Mepo2g00440 246 Pfam Zinc finger, C3HC4 type (RING finger) 148 194 - -
Mepo2g00440 246 SMART ring_2 151 188 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00440 Mepo-Chr2 5217080 5220853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00440 95 193 C3H Transcription Factor Family AT5G01960 29.808 1.34e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00440 K25840 - zju:107430836 383.259