Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00415 ATGGAGAATAGAGATGAAGATGTAAGAGTAGGAGCAAACAAGTATAGAGAAAACCAACCAATAGGAACTGCTGCTCAGTCTCAAGACAATGATGCTAAAGACTATAAAGAGGCACCTTCAGCACCTTTATTTGAGCATGGAGAGTTATCATCATGGTCTTTCTATAGGGCAGGGATTGCTGAGTTTGTGGCCACATTTTTGTTTCTTTATATAACGGTTTTAACTGTGATGGGTGTGAATAAATCCAGTAACAAATGCTCCTCAGTTGGTGTTCAAGGGATTGCTTGGGCTTTTGGTGGAATGATTTTTGCTCTTGTTTATTGTACTGCTGGTATCTCAGGTGGTCACATTAATCCAGCAGTGACATTTGGGCTTTTCTTGGCACGCAAGCTATCTCTAACTAGGACACTGTTCTACATAATTATGCAATGTTTGGGTGCTATTTGTGGTGCTGCTGTTGTTAAGGGCTTCCAACCACACCAATATGAGAGACTTGGTGGTGGTGCCAACACTCTCAATAAAGGTTACTCCATAGGTGATGGACTTGGAGCAGAGATTGTTGGTACATTTGTTCTTGTTTACACTGTCTTCTCTGCTACTGATGCCAAGAGAAATGCAAGAGACTCCCATGTTCCTATTTTGGCACCTCTACCAATTGGATTTGCTGTTTTTTTGGTGCATTTGGCTACAATTCCAATTACAGGGACTGGTATTAACCCAGCTAGAAGTCTAGGTGCTGCTCTTATATACAACAAGGACCAAGCTTGGGATGACCATTGGATTTTCTGGGTAGGGCCTTTCACTGGGGCAGCATTTGCAGCTCTTTACCATCAAATAGTCATCAGAGCCATCCCTTTCAAGTCAAAGTGA 870 0.4218 MENRDEDVRVGANKYRENQPIGTAAQSQDNDAKDYKEAPSAPLFEHGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVNKSSNKCSSVGVQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRTLFYIIMQCLGAICGAAVVKGFQPHQYERLGGGANTLNKGYSIGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWVGPFTGAAFAALYHQIVIRAIPFKSK 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00415 289 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g00415 289 PRINTS Major intrinsic protein family signature 220 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g00415 289 PRINTS Major intrinsic protein family signature 184 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g00415 289 PRINTS Major intrinsic protein family signature 135 154 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g00415 289 PRINTS Major intrinsic protein family signature 56 75 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g00415 289 PRINTS Major intrinsic protein family signature 98 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g00415 289 NCBIfam MIP family channel protein 60 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g00415 289 SUPERFAMILY Aquaporin-like 48 282 IPR023271 -
Mepo2g00415 289 ProSitePatterns MIP family signature. 116 124 IPR022357 -
Mepo2g00415 289 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 285 IPR034294 -
Mepo2g00415 289 CDD MIP 56 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g00415 289 Pfam Major intrinsic protein 48 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g00415 289 FunFam Probable aquaporin PIP1-2 41 289 - -
Mepo2g00415 289 MobiDBLite consensus disorder prediction 1 35 - -
Mepo2g00415 289 Gene3D Glycerol uptake facilitator protein. 41 288 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00415 Mepo-Chr2 4612181 4614710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00415 1 289 Major Intrinsic Protein MIP AT3G61430 83.737 8.20e-177 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00415 K09872 - cave:132192212 529.635