Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00366 ATGTTGCATAATCTTTCTGTGATTAACTTGAAAAACAATAAATTTGATGGTAAAATTCCATCAACTATTGGGAATATCTCAAGCATTAGTCAAATTGATTTGTCTCATAACAAATTTGCTGGTGAAATTCCTGACTCTTTTACCAAACTAGCAAATCTCAGTTCATTCAATGTGTCTCATAACAATCTATCTGGTCCTGTTCCATCACTACTTTCCAAAAGATTCAATGCTAGTTCATTTCAAGGGAATTTTGGTCTATGTGGTTACATAAGTTCAAAACCATGTCCTTCAGCATCACCACCTCATAATCTTCCAGCTCAATCACCAGAAGAATCTTTTTCAAAGCCGCGTCATCACAGGAAATTGAGCACAAAGGACATTATCCTCATAGTAGCTGGTGTTCTTTTGTTGATTTTGCTATTACTTTGCTGCTTTTTGCTTTGTTGTTTGGTCAGGAAAAGAGCTTCTTCAAGCAGAAGGAGTAGTAAAGCTGCTAAAGCTGCTGCTTCTGCTAGGAGTGTGGAGAAAGGTGGTTCAGCTGGTGGTGGTGAAGCTGTATCAGGAGGTGAAGCTGGTTACTTTGATGGACCATTTGTGTTCACTGCTGATGATCTTTTGTGTGCTACTGCTGAGATAATGGGAAAAACTGCTTATGGAACAGCTTACAAGGCAACGTTGGAAGATGGTAATCAAGTTGCTGTGAAGAGATTGAGGGAGAAGACTACTAAAGGGCATAAGGAGTTTGAAGCTGAGGTTGCTTCACTTGGAAAAATCAGACATCCAAATCTTTTGGCGCTTAGGGCTTACTATCTTGGACCTAAAGGAGAGAAGCTGCTTGTATTTGATTACATGAGTAGAGGAAGCCTAGCATCATTCCTTCATGGTTTGTGGATATGTACTAGTGGATCAGCTGGTGGTGGTGAAGCTGTATCAGGAGTTGAAGCTGGTTACTTTGATGGACCATTTGTGTTCACTGCTGATGATCTTTTGTGTGCTACTGCTGAGATAATGGGAAAAACTGCTTATGGAACAGCTTACAAGGCAACATTGGAAGATGGTAATCAAGTTGCTGTGAAGAGATTGAGGGAGAAGACTACTAAAGTGCAAAGAGAAATATGGACGGATTGTAATACCTGTTTTCTATTGGGTAGATCCTACAAATGTACGACATCAAAAGAAGAGCTATGA 1188 0.3981 MLHNLSVINLKNNKFDGKIPSTIGNISSISQIDLSHNKFAGEIPDSFTKLANLSSFNVSHNNLSGPVPSLLSKRFNASSFQGNFGLCGYISSKPCPSASPPHNLPAQSPEESFSKPRHHRKLSTKDIILIVAGVLLLILLLLCCFLLCCLVRKRASSSRRSSKAAKAAASARSVEKGGSAGGGEAVSGGEAGYFDGPFVFTADDLLCATAEIMGKTAYGTAYKATLEDGNQVAVKRLREKTTKGHKEFEAEVASLGKIRHPNLLALRAYYLGPKGEKLLVFDYMSRGSLASFLHGLWICTSGSAGGGEAVSGVEAGYFDGPFVFTADDLLCATAEIMGKTAYGTAYKATLEDGNQVAVKRLREKTTKVQREIWTDCNTCFLLGRSYKCTTSKEEL 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00366 395 Pfam Protein tyrosine and serine/threonine kinase 211 294 IPR001245 GO:0004672|GO:0006468
Mepo2g00366 395 Gene3D Phosphorylase Kinase; domain 1 324 384 - -
Mepo2g00366 395 SUPERFAMILY Protein kinase-like (PK-like) 211 296 IPR011009 -
Mepo2g00366 395 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 317 373 - -
Mepo2g00366 395 ProSiteProfiles Protein kinase domain profile. 207 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g00366 395 MobiDBLite consensus disorder prediction 98 117 - -
Mepo2g00366 395 SMART tyrkin_6 211 380 IPR020635 GO:0004713|GO:0006468
Mepo2g00366 395 Gene3D Phosphorylase Kinase; domain 1 213 285 - -
Mepo2g00366 395 FunFam Leucine-rich repeat receptor-like protein kinase 193 283 - -
Mepo2g00366 395 FunFam Leucine-rich repeat receptor-like protein kinase 4 97 - -
Mepo2g00366 395 Gene3D Ribonuclease Inhibitor 1 102 IPR032675 -
Mepo2g00366 395 SUPERFAMILY L domain-like 2 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00366 Mepo-Chr2 3935139 3936573 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00366 5 81 Receptor kinase-like Gene Family AT3G51740 32.468 7.23e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mepo2g00366 PK_Tyr_Ser-Thr 3.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00366 - - gmx:100799290 416.001