Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00339 ATGTCTTTTAGTTTCAACAATCACTTTTCCAACACAAACAATAACATCACCACCTTGGATATTGCTAACTTTGTTGAAACTTCTTCTCAACTAAAAACTCATGATGATGATCATTTTGCACTTGATGAAGTAATTTACCCTTCTTATTCTGATTTTCCACCTGGTTTTAGCCCATCAGAGTTATTGAATTCACCTTCCTTTCTTTCTTCTTCTAATATTCCTTCATCATATACAAATGAGCCTTCTACTGTGCAAAGCATCAACCAACAGCAAAGCAAGGAATTAGAAGAGAGAAGCTTCTCTGAGCCCTCTTTCCAGACACAAAAACAGACCATGCATGATCTCTTTCAATCTTCCACAAGTATGTTTCAACCGGAGGAGCCACTAAAGACACTGGACACATTGATATTCAATGAATCTACAAAGCAAACAAATTTTTCATTTGAAGGAACAACAAAACATGAAACACAAACAAATTCTTCAGTTCCTAATTCTAGTTACTTTAACAATACTACTGCTTCTATGTCTATAAGAGAACAAAAAAAATCAGAAGAAGATGGATACAGATGGCGAAAATATGGAGAGAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGTTATTACAAGTGCACTAATCCAATTTGCTCAATGAAGAAGAAAGTTGAAAGGTCTTTGGATGATGGACAAATTACTCAAATAGTATATAAAGGAAGTCATAACCATCCTAAACCTCAGTGTACAAAAAGAAGAGCAAATTCTCAATATATTCATCAACCTTCTTCATCATGCAACAACTCTATGGCTTCTGATCTTTCTTTGGGAGAGGATGATTTTGATCAAACATCACAAACTAGTTTTTCTGGAGGAGATTATGATGACTTGGGAATAGAGGCCAAAAGATGGAAAGGAGAGAATGAAAATGATAGCTATTCTTATTCCACAGAAGGGTGTAGAACTGTTAAAGAACCTAGAGTTGTGGTTCAAACTACTAGTGAAATTGATATTCTTGATGATGGATATAGGTGGAGGAAATATGGACAGAAAGTAGTTAAAGGAAATCCAAACCCAAGGAGCTACTACAAATGTGTAATCCAAGGTTGTACTGTGAGAAAACATGTTGAGAGAGCAGCACATGATATTAAAGCAGTAATCACAACATATGAAGGGAAACATAACCATGATGTACCTCTAGGAAGAGGAATTTCAAGCAGTAGCATAAACAGAACTTCTCTTAACAACAATACATGTAATGTAACACCTATAAGGCCTTCAGCAGTGACTAATTATTCTAGCTTAGCAAATTTTACAAATTCACTTCATGATTCAAAGCTACTAACTTCTGGAAATCAAGAAGAACATTTTCAGCTAGACGCGTTGATGAATTCTAGAAGCTTTTTGGACAGATCAATTGGTTCAAATACCAATTCTGAACAATACGCGATTAAGGATGACTCATTCCTTCAATCTTTTGTATTGAAGAACTTTTAA 1488 0.3488 MSFSFNNHFSNTNNNITTLDIANFVETSSQLKTHDDDHFALDEVIYPSYSDFPPGFSPSELLNSPSFLSSSNIPSSYTNEPSTVQSINQQQSKELEERSFSEPSFQTQKQTMHDLFQSSTSMFQPEEPLKTLDTLIFNESTKQTNFSFEGTTKHETQTNSSVPNSSYFNNTTASMSIREQKKSEEDGYRWRKYGEKQVKGSENPRSYYKCTNPICSMKKKVERSLDDGQITQIVYKGSHNHPKPQCTKRRANSQYIHQPSSSCNNSMASDLSLGEDDFDQTSQTSFSGGDYDDLGIEAKRWKGENENDSYSYSTEGCRTVKEPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCVIQGCTVRKHVERAAHDIKAVITTYEGKHNHDVPLGRGISSSSINRTSLNNNTCNVTPIRPSAVTNYSSLANFTNSLHDSKLLTSGNQEEHFQLDALMNSRSFLDRSIGSNTNSEQYAIKDDSFLQSFVLKNF 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00339 495 MobiDBLite consensus disorder prediction 73 94 - -
Mepo2g00339 495 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 112 417 IPR044810 GO:0003700
Mepo2g00339 495 MobiDBLite consensus disorder prediction 73 104 - -
Mepo2g00339 495 SMART WRKY_cls 336 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g00339 495 SMART WRKY_cls 184 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g00339 495 MobiDBLite consensus disorder prediction 150 171 - -
Mepo2g00339 495 MobiDBLite consensus disorder prediction 247 289 - -
Mepo2g00339 495 ProSiteProfiles WRKY domain profile. 331 396 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g00339 495 FunFam WRKY transcription factor 170 245 - -
Mepo2g00339 495 MobiDBLite consensus disorder prediction 235 290 - -
Mepo2g00339 495 SUPERFAMILY WRKY DNA-binding domain 328 396 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo2g00339 495 Pfam WRKY DNA -binding domain 337 393 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g00339 495 Pfam WRKY DNA -binding domain 185 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g00339 495 FunFam WRKY transcription factor 33 323 389 - -
Mepo2g00339 495 ProSiteProfiles WRKY domain profile. 179 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g00339 495 Gene3D WRKY domain 320 397 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo2g00339 495 Gene3D WRKY domain 169 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo2g00339 495 SUPERFAMILY WRKY DNA-binding domain 182 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00339 Mepo-Chr2 3727268 3730602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00339 56 449 WRKY Transcription Factor Family AT2G38470 45.370 5.54e-97 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo2g00339 WRKY 2.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00339 K13424 - gmx:100127367 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01905 3 27930645 27933339 Mepo2g00339 2 3727268 3730602 PCT