Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00265 ATGGCAAGAGAAGGGTTTGGACTTGAAATAACCGAGCTAAGGTTGGGTTTGCCATGTGGTGAGCCACAAAAGAATGAGAAGAAGAGGATGTTCTCCGAGATTGACGGTGGCGGGGAAGAAAATGGAGGTTCCGGTGACCAGAAAATCGAGAAGAAGAATCAAGTTGTGGGATGGCCTCCGGTGTGTTCATACCGGAAGAAGAACATGAATGAAGGTTCAAAAATGTACATGAAGGTTAGCATGGATGGAGCTCCTTACTTGCGTAAGATTGATCTTGGTTTGCATAAGGGATACTTGGAGTTAGCTTTGGCTTTGGAGAAGCTCTTTGGTTGTTGTGGAATTGAGGAAGCGTTGAAGGATGCAGACAATTGTGAACACGTTCCCATTTATGAGGACAAAGATGGTGACTGGATGCTGGTTGGAGATGTCCCTTGGGAGATGTTTATTGAATCATGCAAGAGGCTGAGGATTATGAAGAGATCAGATGCAAAGGGTTTTGGTTTGCAACCAAAAGGATCTTTAAAGAGATTCATATAG 537 0.4395 MAREGFGLEITELRLGLPCGEPQKNEKKRMFSEIDGGGEENGGSGDQKIEKKNQVVGWPPVCSYRKKNMNEGSKMYMKVSMDGAPYLRKIDLGLHKGYLELALALEKLFGCCGIEEALKDADNCEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKGFGLQPKGSLKRFI 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00265 178 ProSiteProfiles PB1 domain profile. 74 162 IPR000270 GO:0005515
Mepo2g00265 178 MobiDBLite consensus disorder prediction 21 35 - -
Mepo2g00265 178 Pfam AUX/IAA family 48 166 IPR033389 -
Mepo2g00265 178 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 164 IPR003311 GO:0005634|GO:0006355
Mepo2g00265 178 FunFam Auxin-responsive protein 68 170 - -
Mepo2g00265 178 MobiDBLite consensus disorder prediction 21 50 - -
Mepo2g00265 178 Gene3D - 68 171 - -
Mepo2g00265 178 SUPERFAMILY CAD & PB1 domains 67 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00265 Mepo-Chr2 3013450 3017765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00265 50 164 B3 DNA Binding Superfamily AT4G23980 36.522 7.18e-11 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Mepo2g00265 AUX_IAA 2.1e-43 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00265 K14484 - gmx:547784 285.034