Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00259 ATGGCCGGTGGTGGTGGTTCTTCATTGGCAGGTTTGCAAGATCATGTCAAGTTAGCAAGAGATTACGCTCTTGAAGGTCTCTATGATACTTCTATCATCTTCTTTGATGGTGCTATTGCACAAATCAACAGGCATCTAAACAGTGTTGATGACCCTTTAATTCGTGCGAAATGGATGAATGTTAAGAAAGCTCTTTCGGAGGAAACTGAAGTTGTAAAGCAACTAGATGCGGATAAAAGGGCGTTTAAGGATAACCCGATTGGAAGACGTCCTCCGTCTCCTCCAATTTCTACTAAATCTTCATTTGTTTTTCAGCCATTAGATGAGTATCCTACTTCATCTAATTCTTCCTTCGATGATCCCGACGTGTGGAGGCCACCTAGTAGAGATACTAGTAGAAGACCCGGAAGGGGTGGTCAAGTGGGTACTCGCAAATCTAATCAAGATAGTAAATGGGCTCGAGGTGCTACGACAAAGACAACAAGCACCACTGGCCGTGGCGCAAAGGCCGGTGGTGCTACTAGCAGGACTAACTCAGGGGCCCGAGGATCAACTCCTGTAAAGAAAGCTGGTGCATCTGGAAAGTCTAGCAACACAGATGCAGTTAATGGTGATGGTGAAGATGGGAAGTCAAATAAGAGAATATACGAAGGTCCTGACCCTGAATTGGCTGAAATGCTTGAAAGGGATGTGTTAGAAACCTCTCCTGGAGTGAGATGGGATGATGTTGCAGGTCTTACTGAAGCAAAAAGACTTTTAGAAGAAGCCGTTGTGCTTCCCTTATGGATGCCTGAATATTTCCAGGGAATTAGAAGACCTTGGAAAGGTGTCCTTATGTTTGGTCCTCCCGGAACTGGAAAGACACTTCTTGCTAAAGCAGTTGCTACTGAATGTGGGACAACTTTCTTTAATGTTTCTTCTGCTACTTTAGCTTCTAAATGGCGTGGAGAAAGTGAGCGAATGGTGCGGTGTTTGTTTGATCTTGCTAGAGCTTATGCACCAAGTACAATTTTCATCGATGAAATTGATTCTCTATGCAATGCTAGGGGGGCTTCTGGAGAGCATGAATCATCTAGAAGGGTGAAGTCTGAACTTCTGGTTCAGGTTGATGGTGTAAGCAACAGTGCAACAAATGAAGATGGCAGCCGAAAATTAGTAATGGTCTTGGCAGCTACTAACTTCCCATGGGACATAGATGAGGCACTAAGGAGGAGGCTGGAAAAGAGAATATATATTCCTCTTCCAAATTTTGAGAGTCGTAAAGAGTTGATCCGGATAAATTTGAAGACCGTTGAGGTGGCCGCTGATGTCAACATAGATGAAGTGGCTCGCCGGACTGATGGCTATAGTGGAGATGATTTGACAAACGTCTGTCGCGATGCTTCCCTGAATGGAATGAGGCGGAAGATAGCAGGAAAGACTCGTGATGAAATTAAGAGTATGTCTAAGGATGAGATTTCAAAAGATCCTGTTGCCATGTGTGATTTTGAAGAAGCATTGGTAAAGGTCCAACGAAGTGTTTCACCGGCTGATATTGAACGCCATGAGAAGTGGTTTCATGAATTTGGATCAGCATAA 1578 0.4404 MAGGGGSSLAGLQDHVKLARDYALEGLYDTSIIFFDGAIAQINRHLNSVDDPLIRAKWMNVKKALSEETEVVKQLDADKRAFKDNPIGRRPPSPPISTKSSFVFQPLDEYPTSSNSSFDDPDVWRPPSRDTSRRPGRGGQVGTRKSNQDSKWARGATTKTTSTTGRGAKAGGATSRTNSGARGSTPVKKAGASGKSSNTDAVNGDGEDGKSNKRIYEGPDPELAEMLERDVLETSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVSNSATNEDGSRKLVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAADVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKSMSKDEISKDPVAMCDFEEALVKVQRSVSPADIERHEKWFHEFGSA 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00259 525 PANTHER AAA DOMAIN-CONTAINING 28 524 - -
Mepo2g00259 525 FunFam Katanin p60 ATPase-containing subunit A1 415 501 - -
Mepo2g00259 525 Gene3D - 235 515 IPR027417 -
Mepo2g00259 525 Pfam Vps4 C terminal oligomerisation domain 478 523 IPR015415 -
Mepo2g00259 525 FunFam Katanin p60 ATPase-containing subunit A1 235 403 - -
Mepo2g00259 525 MobiDBLite consensus disorder prediction 82 101 - -
Mepo2g00259 525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 237 522 IPR027417 -
Mepo2g00259 525 CDD Kp60-NTD 13 77 - -
Mepo2g00259 525 Hamap Meiotic spindle formation protein mei-1 [mei-1]. 10 525 IPR028596 GO:0008017|GO:0008568|GO:0051013
Mepo2g00259 525 FunFam Katanin p60 ATPase-containing subunit A1 7 83 - -
Mepo2g00259 525 Pfam ATPase family associated with various cellular activities (AAA) 277 414 IPR003959 GO:0005524|GO:0016887
Mepo2g00259 525 MobiDBLite consensus disorder prediction 106 121 - -
Mepo2g00259 525 MobiDBLite consensus disorder prediction 106 217 - -
Mepo2g00259 525 ProSitePatterns AAA-protein family signature. 386 405 IPR003960 GO:0005524|GO:0016887
Mepo2g00259 525 Pfam AAA+ lid domain 436 477 IPR041569 -
Mepo2g00259 525 SMART AAA_5 273 416 IPR003593 GO:0016887
Mepo2g00259 525 MobiDBLite consensus disorder prediction 141 205 - -
Mepo2g00259 525 Gene3D - 6 83 - -
Mepo2g00259 525 Gene3D - 415 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00259 Mepo-Chr2 2968452 2972614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00259 229 517 Calmodulin-binding Proteins AT3G56690 39.933 1.51e-50 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00259 K07767 - mnt:21402373 905.59