Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00257 ATGGAGGTCTTCAAAGCAATTGCCAAGCAAGAAGCTGCAGCTCATTGCAGTGTTGCTATCAGAGCTGATCAGCAGAGTTATAGCTACAAGCAGCTCATCTCGTCGGCACAAAAGATATCTAATCTTTTGTGTGGAAATGATGTGAAGGGAAATCTTGGTGGAGCTCGAATAGGAATAGTAGCGAAACCGTCTGCCGAATTTGTTGCTGGAGTACTTGCGACTTGGTTTAGTGGAGGTGTTGCTGTTCCACTTGCACTCAGCTATCCAGAAGTAGAGCTCCTCTATGTGATGAATAATTCGGATGTGTCTGCAATACTGAGTACGGAAGATCATAGTGAACTAATGCAAAGCATTGCCAAGAAAACCTCATCTCAATTTTTCCATATTCCGCCCGTTCCTAATAATTCCTCAGAGAAGAGCAGAAATGGACATTCACAAAATGGGGAAATTGATGCAGACAGAATTTTCCCAGAAAGCATTGAAAGATCAAGTGAAGATCCGGCACTGATTTTGTATACTAGCGGGACAACAGGTAAACCTAAGGGAGTTGTTCATACACACAGAAGCATCCTTGCTCAGGTCCAAACCTTGACAAAAGCATGGGGGTACACATCTGCTGATCAGTTTTTGCACTTACATGTCCATGGGATTTTCAATGGTTTACTGGCTCCTCTCTACGCAGGTTCCACGGTTGAGTTTTTGCCGAAGTTTAGTGTCAGTGGAATTTGGAAGAGATGGCGTGAGTCATATCCAACTGAAGGATCTAAAGCTGATGGTGCTATAACTGTATTCACTGGAGTTCCAACTATGTACACCCGGTTAATACAAGGTTATCGGGCTATGGATCCTGAGCTGCAAGCCACTTCAGCATCTGGCGCAAGGAATTTGCGTCTAATGATGTGTGGATCCTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAATCCATCACTGGCCATCGCTTACTGGAGCGATATGGCATGACTGAATTTGTCATGGCGTTGTCAAATCCATTGAATGGCGAGCGCAAAGCAGGCACCGTCGGAAAACCATTTCCTGGTGTGCAGGTCAAGATTCTTGTAGATGAAGAGCATGAGAATGAAGAAACTGGAGCTGGTGAGCTTTGCGTTAAAAGCCCTTCATCGTTTAAAGAATATTGGAAACTTCCTGAGGTAACAAAGGAATCATTTACAGACGATGGATTCTTTAAGACTGGAGATGCAGTTACTACGGATAAAGATGGATATTTCATCATTTTAGGACGTACTAACGCAGATATAATCAAGAGCGGTGGCTATAAGCTTTCTGCATTAGAAATTGAATCAGTAATATTAGAGCATCCAACTGTCTCAGAATGTTGCGTTTTGGGCTTACCGGACAAAGACTATGGAGAAATTGTTTGTGCGATTATCGTGCCAAAGGAGAAGCAAGATAAAGAGTCAAAACCTTCTCTAAGCCTTGAAGAATTATCCAACTGGGCCAAGAATAAACTTGCACCTTACAAGATACCAACTCGACTAATCGTGTGGGAGACGCTCCCTCGCAATGCAATGGGGAAGGTAAATAAAAAAGAGCTGAAGAAGCTGGTGCCTTCAGAACAGTAA 1605 0.4336 MEVFKAIAKQEAAAHCSVAIRADQQSYSYKQLISSAQKISNLLCGNDVKGNLGGARIGIVAKPSAEFVAGVLATWFSGGVAVPLALSYPEVELLYVMNNSDVSAILSTEDHSELMQSIAKKTSSQFFHIPPVPNNSSEKSRNGHSQNGEIDADRIFPESIERSSEDPALILYTSGTTGKPKGVVHTHRSILAQVQTLTKAWGYTSADQFLHLHVHGIFNGLLAPLYAGSTVEFLPKFSVSGIWKRWRESYPTEGSKADGAITVFTGVPTMYTRLIQGYRAMDPELQATSASGARNLRLMMCGSSALPQPVMQEWESITGHRLLERYGMTEFVMALSNPLNGERKAGTVGKPFPGVQVKILVDEEHENEETGAGELCVKSPSSFKEYWKLPEVTKESFTDDGFFKTGDAVTTDKDGYFIILGRTNADIIKSGGYKLSALEIESVILEHPTVSECCVLGLPDKDYGEIVCAIIVPKEKQDKESKPSLSLEELSNWAKNKLAPYKIPTRLIVWETLPRNAMGKVNKKELKKLVPSEQ 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00257 534 PANTHER ACYL-COA SYNTHETASE 19 527 - -
Mepo2g00257 534 FunFam Acyl-CoA synthetase family member 3 9 422 - -
Mepo2g00257 534 Pfam AMP-binding enzyme 17 429 IPR000873 -
Mepo2g00257 534 Pfam AMP-binding enzyme C-terminal domain 439 520 IPR025110 -
Mepo2g00257 534 Gene3D - 425 533 IPR045851 -
Mepo2g00257 534 SUPERFAMILY Acetyl-CoA synthetase-like 13 531 - -
Mepo2g00257 534 PRINTS AMP-binding signature 165 176 IPR020459 -
Mepo2g00257 534 PRINTS AMP-binding signature 177 185 IPR020459 -
Mepo2g00257 534 ProSitePatterns Putative AMP-binding domain signature. 170 181 IPR020845 -
Mepo2g00257 534 MobiDBLite consensus disorder prediction 127 153 - -
Mepo2g00257 534 CDD MCS 17 528 - -
Mepo2g00257 534 Gene3D - 3 422 IPR042099 -
Mepo2g00257 534 MobiDBLite consensus disorder prediction 127 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00257 Mepo-Chr2 2958337 2964327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00257 165 530 Monolignol Biosynthesis Gene Families AT4G19010 26.702 3.04e-37 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00257 K18660 - gmx:100813324 883.248