Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00206 ATGGTTTTGTTTGAGGCCGGTAGCATTTGGAGGCCCGGCCTGGTTGAGCACCTTGCACTCCCCAAGGCCGGGCCTGGTACTCTGAAAAGGAGGGTTTGGTTAGGAACATTTGAGACAGCTGAAGAAGCAGCTAGAGCATATGATGAAGCAGCCATTTTAATGAGTGGAAGAAATGCAAAAACAAATTTTCCTGTTTCTGATAACAATTCAATAGCAAATGGCAACAACAAAACCTTTGCAGCATCCTCTTCAACTTCCACTACTACTAATACATCACTCTCTGCAATTCTAAGTGCAAAACTTAGAAAATGTTGCAAGTCACCTTCACCTTCCCTCACTTGTCTAAGGCTTGACACTGAGAATTCACACTTTGGAGTGTGGCAGAAAAGAGCAGGACCTCGTTCGGACTCGAGCTGGATCATGATGGTTGAACTGGAAAGGAAGAAGAAAGAACAAGAAGAGGGTGAAGTTTTGCCAAATTCTGATTCAGAAACATTACCTCATGTTGTTGATAACGAGGATTCGGAGAAGGTCGTAAAACCGGAAAATGAAGATGAAGAAGGAAATGATAATAACAATGGATTGGATGAAGAACAAAGAATTGCGCTTCAAATGATAGAAGAACTTCTCAATAGGAATTAA 642 0.4174 MVLFEAGSIWRPGLVEHLALPKAGPGTLKRRVWLGTFETAEEAARAYDEAAILMSGRNAKTNFPVSDNNSIANGNNKTFAASSSTSTTTNTSLSAILSAKLRKCCKSPSPSLTCLRLDTENSHFGVWQKRAGPRSDSSWIMMVELERKKKEQEEGEVLPNSDSETLPHVVDNEDSEKVVKPENEDEEGNDNNNGLDEEQRIALQMIEELLNRN 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00206 213 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Mepo2g00206 213 Gene3D AP2/ERF domain 6 66 IPR036955 GO:0003700|GO:0006355
Mepo2g00206 213 ProSiteProfiles AP2/ERF domain profile. 6 64 IPR001471 GO:0003700|GO:0006355
Mepo2g00206 213 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 27 167 - -
Mepo2g00206 213 CDD AP2 28 66 IPR001471 GO:0003700|GO:0006355
Mepo2g00206 213 Pfam AP2 domain 29 55 IPR001471 GO:0003700|GO:0006355
Mepo2g00206 213 MobiDBLite consensus disorder prediction 167 187 - -
Mepo2g00206 213 MobiDBLite consensus disorder prediction 150 200 - -
Mepo2g00206 213 SUPERFAMILY DNA-binding domain 28 66 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00206 Mepo-Chr2 2319287 2323202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00206 28 213 AP2-EREBP Transcription Factor Family AT1G15360 57.979 7.52e-61 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo2g00206 AP2 1.8e-06 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00206 - - gmx:100785898 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g00206 2 2319287 2323202 Mepo2g00206 2 2319287 2323202 ECH