Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00180 ATGGCTTTTTGGTTTTGTTGCGGAAATACTTCGGATCGCAAAAAAGGAGAAAGTGAACGATTTAGATGGAGGGTGTTTTCTTTGAAGGAATTAAATTCTGCTACTAATAATTTCAACCATGACAACAAGCTTGGAGGAGGGGACTTAGGCAATGTGTACTGGGGCCAACTTTGGAATGGATCTCAAATTGCAGTGAAAAGATTGAAAGTTTGCAGCAGCAAAGCAGATAGAGAATTTACATTTGAAATTGAGATATTGGCAAGAGTACAACACAAGAATCTTACTAGTTTACGTGGATATTGTGCCGAAGGACAAGAACGGTTAATCGTGTATGATTATATGCCAAATTTTAACTTGTTCTCCCATCTTCATGGACCACAATCAGCAGAATGCCTTCTTGATTGGAATCGACGAATGAATCTTGCCATTGGATGTGCTGAGGGAATTGTGTATCTTCATCACCAAGCAACGCCGCGTATCATCCATAGAGATATCAAACCCAATAATGTGTTATTGGATTCAGATTTCCGAGCTCGAATCGGTGGTTTTGGGTTTGCTAGGTTGATCCCTGATGGAGCAACACAAGTGACTGCTAATGTTAAGGGTACCTTAGGCTACGTTGCACCAGAATATGCTATATCAGGTAAAGTAACTGAAAGTTCTGATGTTTATAGCTTTGGTATACTCCTTCTAGAACTAGCTAGTGGGAAAAAAACCAATTATAAAGATCGAAGAAGGAAAATCAACGAAGAAGAGGAAAAGGAGGAGGAAATTGGATCGAATTCGAATTCTTCGATAGTCAGCATCGGAAGAACGATGTCTGCTGCTGTGTGCGGAAGCAAGAGATCTTTCTTTGAAGAACAACTTCCTCCTTCTCCTCCCTTATCTAAGAGGCTTCGTTGTTCCTCTTCTACTTCTCCGATTCGTTTTCCGACTATTCCTTCTCTCTTTGATCAGCTTCGTAATCTCTTCCCTCATATGGACCAATTGGTTCTTGAGAGAGCTCTCCAAGAATGTAACAATGATCTAGATGCTGCTATCAAGAGCCTGAATGAGCTTTACTTGGGAGCTGCAGGTGGGAATTCTGGAACTGCTGAAGAATCCGAGATTGATGTCAATGTGGATGCAGGTAAATTGGAGAATGATGGGAATGCTTCTGCTTCTGAGAATCAATCTACTTTGAACAGCCTTCCTGCAGATGGAGCCGAATGGATTGACTTTTTTGTTCGAGAAATGATGGTTGCTACCAGTGTTGATGATGCTAGAGCCCGTGCTGCTAGAATGCTGGAGGTTCTCGAGAAATCAATCAGTGAACGAGCAAGGGCTGAGGCGACAGATGCTCTTCAGAAGGAAAATTTGATGCTGAAGGAGCAAATCGAAGTGCTGATTAAGGAGAAAAATTCTTTTAAAAACGCATTTAGGATCCAGCACGAGCGTCTTTCTGATTATGATAATAAGAATCAAGAATTGCAGCATTTGAAGCAGTTGGCGTCTCAATACCAGGAGCAGATCAGAACTCTTGAGATGAATAACTATGCTTTGGCAATGCATTTGAAGCAGGCTCAACAGAGCAACGGATTTCAAGGGCATTTCCCACCTGATATCTTCTAA 1611 0.4153 MAFWFCCGNTSDRKKGESERFRWRVFSLKELNSATNNFNHDNKLGGGDLGNVYWGQLWNGSQIAVKRLKVCSSKADREFTFEIEILARVQHKNLTSLRGYCAEGQERLIVYDYMPNFNLFSHLHGPQSAECLLDWNRRMNLAIGCAEGIVYLHHQATPRIIHRDIKPNNVLLDSDFRARIGGFGFARLIPDGATQVTANVKGTLGYVAPEYAISGKVTESSDVYSFGILLLELASGKKTNYKDRRRKINEEEEKEEEIGSNSNSSIVSIGRTMSAAVCGSKRSFFEEQLPPSPPLSKRLRCSSSTSPIRFPTIPSLFDQLRNLFPHMDQLVLERALQECNNDLDAAIKSLNELYLGAAGGNSGTAEESEIDVNVDAGKLENDGNASASENQSTLNSLPADGAEWIDFFVREMMVATSVDDARARAARMLEVLEKSISERARAEATDALQKENLMLKEQIEVLIKEKNSFKNAFRIQHERLSDYDNKNQELQHLKQLASQYQEQIRTLEMNNYALAMHLKQAQQSNGFQGHFPPDIF 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00180 536 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 273 536 - -
Mepo2g00180 536 Coils Coil 445 465 - -
Mepo2g00180 536 Gene3D Transferase(Phosphotransferase) domain 1 114 317 - -
Mepo2g00180 536 Coils Coil 483 510 - -
Mepo2g00180 536 Gene3D Phosphorylase Kinase; domain 1 8 113 - -
Mepo2g00180 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Mepo2g00180 536 Pfam Protein kinase domain 39 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g00180 536 CDD CUE 315 350 - -
Mepo2g00180 536 ProSiteProfiles Protein kinase domain profile. 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g00180 536 SUPERFAMILY UBA-like 308 356 IPR009060 GO:0005515
Mepo2g00180 536 Coils Coil 238 258 - -
Mepo2g00180 536 ProSiteProfiles CUE domain profile. 312 355 IPR003892 GO:0043130
Mepo2g00180 536 Pfam CUE domain 317 352 IPR003892 GO:0043130
Mepo2g00180 536 FunFam PTI1-like tyrosine-protein kinase At3g15890 10 113 - -
Mepo2g00180 536 Gene3D - 318 356 - -
Mepo2g00180 536 SUPERFAMILY Protein kinase-like (PK-like) 19 242 IPR011009 -
Mepo2g00180 536 SMART serkin_6 38 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00180 Mepo-Chr2 2025377 2034064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00180 25 238 Trihelix Transcription Factor Family AT1G68690 51.402 8.18e-69 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Mepo2g00180 Pkinase 2.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00180 - - gmx:100813137 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g00180 2 2025377 2034064 Mepo2g00180 2 2025377 2034064 ECH
Mepo6g04338 6 55392288 55394887 Mepo2g00180 2 2025377 2034064 PCT