Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00157 ATGGAAGAGTCATGGGAAAATTTTCATCTTGACACGGAATTGGATTGCGGTGATGATTATTTCATAGGAAACGATTTTCTTCAAGATATTTTGTTACAAACACCACCACAAAGTTTAATGTATTCTGAAAGTGAAAACAATTATATTACCGTTAACGTTAACCGTGGTGTTGAGGTTGTTGGTAACATGGTTAAAAGTAACAGCTCAAACTCAATAGTGTCTCAACAACAACATGGTTTGAAATCAAAGAAGGTTCCTCGTAAAAGTTCTTCTCCAAAGACATATATTTTGTCTTTTGATAATTCAACTATGATACCAGCAGCTACACCTAATTATAAGAATAAACGTAACCACGAAAGTACTGAGATGAAAATAAATCAACAAATCAATGGAGTGAAGAAAGGTAGAAGCAGTTCACAGTGTATTGATCATATAATGGCAGAGAGAAAACGGAGACAGGAATTGAGTGAGAAATTCATTGCACTTTCAGCTACTATTCCTGGCTTGAGCAAGACAGACAAGGCTTCAATACTTCGAGAAGCAATTGATTATATGAAAGAACTTAAAGAACGTGTTGAGGAGCTCGAGAAACAAGACAAAAATGTTGGTCGGAAACCTTATTCATGTGGAATTAATAATTACAGTGAAGACACAAATTCTAGTGAAACAAGTTCTGATGATGATTTTAACAACAATATCCTTCCAGAGATTGAAGCAAAAGTCATTGGAAAGGAAGTAGTTATTGAAATCTATTGTGAGAAACAAAAGGGAATTGAACTCAAATTACTTGACCACATTGAAAATCTTCAACTCTTTGTCACAGGTAGCAGTGTCTTGCCGTTTGGGAAATCTGCTATTTCCATCACTACTATTGCTGAGATGGGTGATGGGTACAATGTGACAGTGAATGATCTAGTGAAAAGCATTAGGCATGTACTCTTGAAACCTCAAATAGGATTCCAAAGTGGTCCGTACTAG 978 0.3569 MEESWENFHLDTELDCGDDYFIGNDFLQDILLQTPPQSLMYSESENNYITVNVNRGVEVVGNMVKSNSSNSIVSQQQHGLKSKKVPRKSSSPKTYILSFDNSTMIPAATPNYKNKRNHESTEMKINQQINGVKKGRSSSQCIDHIMAERKRRQELSEKFIALSATIPGLSKTDKASILREAIDYMKELKERVEELEKQDKNVGRKPYSCGINNYSEDTNSSETSSDDDFNNNILPEIEAKVIGKEVVIEIYCEKQKGIELKLLDHIENLQLFVTGSSVLPFGKSAISITTIAEMGDGYNVTVNDLVKSIRHVLLKPQIGFQSGPY 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00157 325 Pfam Helix-loop-helix DNA-binding domain 142 188 IPR011598 GO:0046983
Mepo2g00157 325 PANTHER BHLH TRANSCRIPTION FACTOR 56 315 - -
Mepo2g00157 325 MobiDBLite consensus disorder prediction 211 229 - -
Mepo2g00157 325 MobiDBLite consensus disorder prediction 68 91 - -
Mepo2g00157 325 MobiDBLite consensus disorder prediction 208 229 - -
Mepo2g00157 325 SMART finulus 145 194 IPR011598 GO:0046983
Mepo2g00157 325 Coils Coil 178 205 - -
Mepo2g00157 325 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 136 202 IPR036638 GO:0046983
Mepo2g00157 325 Gene3D - 139 207 IPR036638 GO:0046983
Mepo2g00157 325 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 139 188 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00157 Mepo-Chr2 1723377 1725122 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00157 135 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.109 6.29e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo2g00157 HLH 3.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00157 - - psat:127105379 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04367 6 55752667 55755997 Mepo2g00157 2 1723377 1725122 PCT