Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00156 ATGATTGTAACAACCTTGACACTGACGGTGATGATTTTCTTAGAGATTTTGTTACAAACACCAGAAAGTTTTGAGGTTGTTGGTAACATGGTTAAAAGTGACAGTTCAAACTCAATTGTGTCTCAACAACATCAAGAACAAGAACAACAACATGGTTTGAAATCGAAAAAGGTTCCTCGTAAAAGTTCTTCTCCAAAGACATATATTTTGTCTTTTGATAATTCAACTATGATACCAGCAGCTACACCTAATTATAAGAATAAACGTAACCACGAAAGTACTGAGATGAAAATAAATCAACAAATCAATGGAATGAAGAAAGGTAGAAGCAGTTCACAGTGTATTGATCATATAATGGCAGAGAGAAAACGGAGACAGGAATTGAGTGAGAAATTCATTGCACTTTCAGCTACTATTCCTGGCTTGAGCAAGATGGATAAGGTTTCAATACTTCGAGCAGCAATTGATTACGTGAAACAGCTTAAAGAACGTGTTGAGAAGCTAGAGAAAAAAGAAGAAAATGTTGGGGTCACATCCATGATGGCCCTCAAAAAATCACCTAATTCATGTGGAATTAATGAAGACACAAATTCTAGTGAAAGAAATTGTGATGATGATTGTAACAGCAATATCCTTCCAGATATTGAAGCAAGAGTCATGGGAAAGGAAGTGCTTATTGAAATCCAGTGTGAGAAACAAAATGGAGTTGAACTAAAATTACTTAACCATATTGAAAATGTTCAACTCTTTGTCACTGGTAGCAGTGTCTTGCCTTTTGGGAAATCTGCTATTTCCATCACTATAATTGCTCAGATGGGAGATGAATGTAAAGTGACAATGAATGATCTAGTGAAAAGCATTAGACAAGTGCTGTTGAAACATCAAAGAAGATGCTAA 897 0.3534 MIVTTLTLTVMIFLEILLQTPESFEVVGNMVKSDSSNSIVSQQHQEQEQQHGLKSKKVPRKSSSPKTYILSFDNSTMIPAATPNYKNKRNHESTEMKINQQINGMKKGRSSSQCIDHIMAERKRRQELSEKFIALSATIPGLSKMDKVSILRAAIDYVKQLKERVEKLEKKEENVGVTSMMALKKSPNSCGINEDTNSSERNCDDDCNSNILPDIEARVMGKEVLIEIQCEKQNGVELKLLNHIENVQLFVTGSSVLPFGKSAISITIIAQMGDECKVTMNDLVKSIRQVLLKHQRRC 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00156 298 Gene3D - 103 176 IPR036638 GO:0046983
Mepo2g00156 298 SMART finulus 118 167 IPR011598 GO:0046983
Mepo2g00156 298 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 112 161 IPR011598 GO:0046983
Mepo2g00156 298 Pfam Helix-loop-helix DNA-binding domain 115 162 IPR011598 GO:0046983
Mepo2g00156 298 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 109 174 IPR036638 GO:0046983
Mepo2g00156 298 Coils Coil 151 178 - -
Mepo2g00156 298 PANTHER BHLH TRANSCRIPTION FACTOR 23 294 - -
Mepo2g00156 298 MobiDBLite consensus disorder prediction 37 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00156 Mepo-Chr2 1709844 1713096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00156 54 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 37.698 1.48e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo2g00156 HLH 7.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00156 - - psat:127105379 310.457