Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00149 ATGGCAAGACCACAACAACGTTATAGAGGTGTACGCCAAAGACATTGGGGTTCTTGGGTCTCTGAAATTCGCCACCCTTTATTGAAGACAAGAATATGGTTAGGAACATTTGAAACAGCAGAAGATGCAGCAAAAGCATATGATGAAGCAGCAAGATTAATGTGTGGACCAAAAGCACGTACCAATTTCCCATACAACCCAAATGGACCACAATCTTCTTCATCTAAGCTTCTTTCAGCAACTTTAACTGCAAAGTTAAATAAGTGTCACATGGCTTCTCTTTCTCTTCAAATGACCAAACAACAACAACCACCACAAAAAGAGCCACAACAAGTTTCAACACAAAGTTTCAATTCTTCAATTAATAATAGCCCTTTTGTTTATGGCAATGACATTGGTGGAACAAGTGGTGAAACTAGTTTAATTAGATGGCTTGATGAAGGGAATAATTGTGTTGGGTTTGAAGGTCAAGTTGAAGTTTCTCATCAACAATTTCAACCTGTTCTTGAAGATGATCACATTGAACAAATGATTCAAGAGTTGCTTGATTATGGTTCAATTGAGCTTTGTTCTGTTGGTTCATCTTAG 588 0.3759 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAAKAYDEAARLMCGPKARTNFPYNPNGPQSSSSKLLSATLTAKLNKCHMASLSLQMTKQQQPPQKEPQQVSTQSFNSSINNSPFVYGNDIGGTSGETSLIRWLDEGNNCVGFEGQVEVSHQQFQPVLEDDHIEQMIQELLDYGSIELCSVGSS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00149 195 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Mepo2g00149 195 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Mepo2g00149 195 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Mepo2g00149 195 FunFam Ethylene-responsive transcription factor 2 6 65 - -
Mepo2g00149 195 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Mepo2g00149 195 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Mepo2g00149 195 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Mepo2g00149 195 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Mepo2g00149 195 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Mepo2g00149 195 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 107 - -
Mepo2g00149 195 MobiDBLite consensus disorder prediction 98 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00149 Mepo-Chr2 1579538 1581433 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00149 1 192 AP2-EREBP Transcription Factor Family AT5G25190 63.542 3.94e-77 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mepo2g00149 AP2 1.3e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00149 - - gmx:100527365 272.707