Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00116 ATGGCTAAGAAATCTCAGAAAAATCTCAAAAACACTTCTACTTCTTCTTCCTCCTCCACCACCACGGTGAAACGTAAACGTAAAAGCATTCCAAGAAACTCACCTCCACAAAGAAGCTCAGTTTATAGGGGTGTCACAAGACATCGTTGGACCGGTCGATATGAAGCTCATTTGTGGGATAAGAATTGCTGGAATGAATCACAAAGCAAGAAAGGAAGACAAGTATATTTAGGGGCATATGATGATGAAGAAGCTGCAGCACGTGCCTATGACTTGGCAGCATTGAAGTACTGGGGCCAAGACACAATTCTCAATTTTCAAGTATCAAATTATCAAGAGGAGCTTAAAGGGATGGAAGGCCAATCAAAAGAAGAATATATTGGATCCTTAAGAAGAAAAAGCAGTGGATTTTCTAGAGGAGTCTCAAAATACAGAGGTGTAGCAAGACACCACCACAATGGAAGATGGGAAGCTCGAATTGGCAGGGTCTTCGGCAACAAATATTTATACCTTGGAACTTTTGCTACACAAGAAGAAGCAGCCACAGCGTATGACAGGGCAGCAATAGCGTATAGAGGGCATAATGCTGTTACAAACTTTGATCTTAGTCGTTACATTAATAACAACCATAATCAAAATGCTAGCAATAATCAAGAGTTGGATCTTAATCAAGAACTTGGTGGTGGTGCCACACCAGCATCTTCGATTGATCTTATCTTAGAATCACCAAAATTCGAAGAAATGTTAGAAAATTCATCATCGTCGGTTGAAGATAGTTACACTCCACCGCCTGTCAAATCAACCATTACACGTCGGACATTTCCAGAAGATATTCAAACAATTTTTGAAACACAAGATTCAAGTATCTACACTGAAAATGATGATGACAACATATTTGGTGAGTTAAGCTCAATTGCTGCACCAATTTTTCATTATGGGCTTGATGCTTGA 951 0.3954 MAKKSQKNLKNTSTSSSSSTTTVKRKRKSIPRNSPPQRSSVYRGVTRHRWTGRYEAHLWDKNCWNESQSKKGRQVYLGAYDDEEAAARAYDLAALKYWGQDTILNFQVSNYQEELKGMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTFATQEEAATAYDRAAIAYRGHNAVTNFDLSRYINNNHNQNASNNQELDLNQELGGGATPASSIDLILESPKFEEMLENSSSSVEDSYTPPPVKSTITRRTFPEDIQTIFETQDSSIYTENDDDNIFGELSSIAAPIFHYGLDA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00116 316 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Mepo2g00116 316 PRINTS Ethylene responsive element binding protein signature 183 203 IPR001471 GO:0003700|GO:0006355
Mepo2g00116 316 FunFam AP2-like ethylene-responsive transcription factor 142 203 - -
Mepo2g00116 316 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12 218 - -
Mepo2g00116 316 SUPERFAMILY DNA-binding domain 142 203 IPR016177 GO:0003677
Mepo2g00116 316 SMART rav1_2 41 113 IPR001471 GO:0003700|GO:0006355
Mepo2g00116 316 SMART rav1_2 143 207 IPR001471 GO:0003700|GO:0006355
Mepo2g00116 316 Pfam AP2 domain 142 194 IPR001471 GO:0003700|GO:0006355
Mepo2g00116 316 Pfam AP2 domain 40 99 IPR001471 GO:0003700|GO:0006355
Mepo2g00116 316 ProSiteProfiles AP2/ERF domain profile. 41 107 IPR001471 GO:0003700|GO:0006355
Mepo2g00116 316 CDD AP2 142 203 IPR001471 GO:0003700|GO:0006355
Mepo2g00116 316 MobiDBLite consensus disorder prediction 1 24 - -
Mepo2g00116 316 ProSiteProfiles AP2/ERF domain profile. 143 201 IPR001471 GO:0003700|GO:0006355
Mepo2g00116 316 SUPERFAMILY DNA-binding domain 40 109 IPR016177 GO:0003677
Mepo2g00116 316 MobiDBLite consensus disorder prediction 1 43 - -
Mepo2g00116 316 FunFam AP2-like ethylene-responsive transcription factor 40 109 - -
Mepo2g00116 316 Gene3D AP2/ERF domain 142 203 IPR036955 GO:0003700|GO:0006355
Mepo2g00116 316 Gene3D AP2/ERF domain 41 109 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00116 Mepo-Chr2 1186769 1192974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00116 37 205 AP2-EREBP Transcription Factor Family AT5G57390 72.781 1.03e-88 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mepo2g00116 AP2 2.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00116 K09285 - gmx:100807781 407.527