Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00078 ATGGATTGTTCATCATATATCAACACTTCCTTGGATCTCAACATTATTCCCTATAGAGCTCATGAAGAAGTTCCAAAGAAGGAGGTGGAAAGCAACTTTTTCTCCTTGGGGATGACCAACTTTTCTGTGAAAGATGAGTCCATTGATGAATTGGAGGAGGAACTAAAAAGGGTAACCTTAGAAAACAAGAAATTGGTGGAAATGCTCTCAGTGGTTTGTGAGAATTACAACACTTTGAGAAGTCATTTGATGGAATATATGAAGAGAAATCCTGAGAAAGAAGTTAGCACATCATCAAAGAAAAGGAAATCTGAAAGCAGCAATAATAACAATAGTAATTTGATTGGAATTAACAATGGAAATTCCGAGAGTAGCTCTACCGATGAAGAATCGTGCAAGAAACCAAGGGAAGAAGAAAATATTAAAGCCAAAATTTCAAGAGCTTATGTTAGGACTGAAGCTTCTGATACAGGCCTTATTGTGAAGGATGGATACCATTGGAGGAAATATGGACAAAAAGTGACCAGAGATAACCCTTGTCCAAGAGCTTATTTCAAATGCTCTTTTGCTCCAAGCTGCCCTGTCAAAAAGAAGGTGCAAAGAAGTGTCGATGATCAATCCATGCTTGTTGCAACTTATGAAGGGGAGCACAATCATCCTCAACCTCCTCAAATTGAGTCAGCATCAGGTTCTGGCCGTAGCGTGAACCACAGTTCGGTACCTTGTTCGGCGTCACTCACCTCACCAGCACCAGCACCAAAAGTGGTTACACTAGACTCAACAACTTCTAAGAATAGTAAAGATTCCAAGAGTATTGAACCAAGAAAAGATTCGCCTAAGGTACCAAAGAATTTGGTGGAACAAATGGCTACTTCATTGACAACTGATCCAAATTTTAGAGCAGCACTTGTTGCAGCCATTTCAGGAAGATTGGTGCACAACAATTAA 948 0.3966 MDCSSYINTSLDLNIIPYRAHEEVPKKEVESNFFSLGMTNFSVKDESIDELEEELKRVTLENKKLVEMLSVVCENYNTLRSHLMEYMKRNPEKEVSTSSKKRKSESSNNNNSNLIGINNGNSESSSTDEESCKKPREEENIKAKISRAYVRTEASDTGLIVKDGYHWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSMLVATYEGEHNHPQPPQIESASGSGRSVNHSSVPCSASLTSPAPAPKVVTLDSTTSKNSKDSKSIEPRKDSPKVPKNLVEQMATSLTTDPNFRAALVAAISGRLVHNN 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00078 315 ProSiteProfiles WRKY domain profile. 160 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g00078 315 MobiDBLite consensus disorder prediction 102 126 - -
Mepo2g00078 315 MobiDBLite consensus disorder prediction 266 282 - -
Mepo2g00078 315 Pfam WRKY DNA -binding domain 162 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g00078 315 Gene3D WRKY domain 144 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo2g00078 315 MobiDBLite consensus disorder prediction 222 246 - -
Mepo2g00078 315 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 34 311 IPR044810 GO:0003700
Mepo2g00078 315 SMART WRKY_cls 161 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g00078 315 SUPERFAMILY WRKY DNA-binding domain 159 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo2g00078 315 FunFam WRKY transcription factor 40 146 223 - -
Mepo2g00078 315 Coils Coil 41 68 - -
Mepo2g00078 315 MobiDBLite consensus disorder prediction 88 139 - -
Mepo2g00078 315 MobiDBLite consensus disorder prediction 215 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00078 Mepo-Chr2 816036 818770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00078 4 315 WRKY Transcription Factor Family AT1G80840 51.875 6.45e-97 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo2g00078 WRKY 2.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00078 - - gmx:100807966 431.024