Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00062 ATGGACAATGAGGAAATTCCATCAGTACCTTCTACCCCTGCAACACCAGGTACTCCTGGTGCTCCTCTTTTTGGTGGATTCAGGTCTGAGAGAACTAGAAATGGTTCTGTTGGTAGAAGTAAGTCACTTCTCAAGAATTTAAAATGTTTGAGTGTTGAAGATTGGACTTTGGAAGATGGAGCCTTACCTAAAGTCACTTGCTCATTACCTCCCCCTCCTGTTCCTCTTGCCAAAAAGGTTGGAGCTGAGTTTATAGGCACATACATTCTAATGTTTGCTGGAATAGCCACTGCAATTGTGAACCAAAAAGTACATAACTCAGAAACACTAATTGGATGTGCTGGAGCTACTGGACTTGCTGTTATGATCATAATTTTATCAACTGGTCACATTTCTGGTGCTCATCTTAATCCGGCCGTCACGATTTCATTTGCTGCATTAAAACACTTCCCCTGGAAAAATGTACCTTTGTATATTGCTGCACAAGTTTTGGCATCAATATGTGCTTCTTTTACTCTGAAAGGGGTTTTTCATCCATTTATGAGTGGTGGTGTCACGGTTCCTTCAGTTGAATATGGCCAAGCTTTTGCTTTAGAGTTTATTATCAGCTTTAATCTCATGTTTGTTGTCACTGCAGTGGCCACCGACACAAGAGCTGTGGGAGAACTTGCGGGAATCGCGGTGGGAGCCACTGTCATGCTCAACATACTCATTGCTGGGCCTGCAACTGGAGGTTCAATGAATCCAGTAAGAACACTAGGTCCAGCAATTGCTGCAAACAACTACAAAGGCATATGGCTATATCTCATAGCCCCTATTCTTGGGGCTCTTGGTGGGGCAGGTGCTTACACTGCTGTCAAGCTTCCTGATGAAGAGTTTAACTCTGAGGTTAAAGCCTCTTCTGCCCCTGGAAGTTTCAGAAGATGA 927 0.4358 MDNEEIPSVPSTPATPGTPGAPLFGGFRSERTRNGSVGRSKSLLKNLKCLSVEDWTLEDGALPKVTCSLPPPPVPLAKKVGAEFIGTYILMFAGIATAIVNQKVHNSETLIGCAGATGLAVMIIILSTGHISGAHLNPAVTISFAALKHFPWKNVPLYIAAQVLASICASFTLKGVFHPFMSGGVTVPSVEYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGGSMNPVRTLGPAIAANNYKGIWLYLIAPILGALGGAGAYTAVKLPDEEFNSEVKASSAPGSFRR 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00062 308 Pfam Major intrinsic protein 76 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g00062 308 CDD MIP 78 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g00062 308 MobiDBLite consensus disorder prediction 1 36 - -
Mepo2g00062 308 SUPERFAMILY Aquaporin-like 75 295 IPR023271 -
Mepo2g00062 308 PANTHER AQUAPORIN NIP2-1 58 296 IPR034294 -
Mepo2g00062 308 Gene3D Glycerol uptake facilitator protein. 73 299 IPR023271 -
Mepo2g00062 308 ProSitePatterns MIP family signature. 135 143 IPR022357 -
Mepo2g00062 308 FunFam Aquaporin NIP2-1 66 298 - -
Mepo2g00062 308 PRINTS Major intrinsic protein family signature 266 286 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g00062 308 PRINTS Major intrinsic protein family signature 78 97 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g00062 308 PRINTS Major intrinsic protein family signature 154 173 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g00062 308 PRINTS Major intrinsic protein family signature 229 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g00062 308 PRINTS Major intrinsic protein family signature 117 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo2g00062 308 PRINTS Major intrinsic protein family signature 198 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00062 Mepo-Chr2 655324 661069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00062 1 308 Major Intrinsic Protein MIP AT1G80760 75.641 1.25e-160 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00062 K09874 - gmx:100798410 440.269