Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00058 ATGAATCTTCCATGCCTAAAACCTTCTATGGATAGAAAACACAAAAATGATTCATCTCCTCAACTTGTACTTGATCTAAGTCTCTCTAGCAAGGATCCATGTGGTGATTCAAAGTCAGAACTTAACCTCCTCAACTGTTTCCATGCAAATTTATCGGAAAGCTCCTCGGAATCTAGTCATGAGAATGAACTTGATCCGAGAGTTTTCTCATGCAACTACTGCCAAAGAAAGTTTTATAGTTCTCAAGCACTTGGAGGACACCAGAATGCACACAAGCGCGAAAGAACTTTGGCGAGAAGAGGCTATACAACTAGCATGTCTTCTTCTTCTCTACCTTCTTATGGCTTGTGTAACAAATCACTTGGCATTCAAGTGCATTCTATGATTAACAAACCTTCTTATCAAACACCCCTTTTTGGATTTTGTTCAAATGGACAAAATGGATGGAGAAGACAAAACTTTGATTCACAACCAGCAATTGGAAAGCTTCCTTTAGGAAATTTTCATGTGAGGGATGAAGTTGAACCATCCTTTGGTGGTGGCATTTCAAGGGTAGCCATGTTTCCTAAAAGGCTTGCAAATGAAGGACTTGGAAGTTACTTATTGGATAGTAACACTTCTCATTTGCAGTCTAAACAAGAGAAGTTGCAAAAACTTGACTTATCTCTTAAGCTCTAA 678 0.3864 MNLPCLKPSMDRKHKNDSSPQLVLDLSLSSKDPCGDSKSELNLLNCFHANLSESSSESSHENELDPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLARRGYTTSMSSSSLPSYGLCNKSLGIQVHSMINKPSYQTPLFGFCSNGQNGWRRQNFDSQPAIGKLPLGNFHVRDEVEPSFGGGISRVAMFPKRLANEGLGSYLLDSNTSHLQSKQEKLQKLDLSLKL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00058 225 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 12 225 IPR044246 GO:0009788
Mepo2g00058 225 MobiDBLite consensus disorder prediction 1 21 - -
Mepo2g00058 225 FunFam Zinc finger protein 2 48 114 - -
Mepo2g00058 225 Gene3D Classic Zinc Finger 48 113 - -
Mepo2g00058 225 SUPERFAMILY beta-beta-alpha zinc fingers 66 96 IPR036236 -
Mepo2g00058 225 ProSitePatterns Zinc finger C2H2 type domain signature. 71 91 IPR013087 -
Mepo2g00058 225 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 96 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00058 Mepo-Chr2 604395 605416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00058 13 225 C2H2 Transcription Factor Family AT1G80730 39.167 4.60e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo2g00058 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00058 - - mtr:25491181 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g00058 2 604395 605416 Mepo2g00058 2 604395 605416 ECH