Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00037 ATGACTATCCAAACAATGGAACAAGAGTTCATTTTCAAGTCTAAGCTTCCTGATATCTACATTCCCAAACACCTTCCTCTTCATTCATATTGCTTTGAAAATCTATCAAAATATGGTTCACGTCCTTGCCTCATCAATGCTCCAACTGGTGAAATCTACACCTACTATGATGTCGAACTCACTGCCCGAAGAGTCGCCTCCGGTCTCAACAAACTTGGCATCCAACAAGGGGATGTTATCATGGTTCTTCTCCCTAATTGCCCGGAATTTGTGTTCGCCTTTCTCGGTGCTTCTTTTCGCGGCGCCATAATGACTGCCGCGAATCCCTTCTTCACCTCAGCTGAGATTGCTAAACAAGCAAAAGCTTCCAATACTAAGTTGCTTGTAACACAAGCTTGTTACTATGACAAAGTTAAGGATTTGGAAAATGTGAAGCTGGTTTTCGTGGACTCTTCCCCAGAGGAGGACAATCACATGCATTTCAGTGAGCTGGTTCAGGCTGATGAGATTGAAATCGAAGAGGTAAAAGTGAACATCAACCCTGATGATGTAGTTGCATTACCATATTCATCTGGAACAACCGGTTTACCTAAAGGTGTTATGCTAACACACAAAGGGTTGGTGACAAGTATAGCACAACAAGTTGATGGAGAAAATCCAAATCTCTATTATCACAGTGAAGATGTCATACTATGTGTGCTTCCCATGTTTCATATCTACTCACTCAACTCCGTTTTGCTTTGTGGTTTGAGAGCTAAAGCTTCAATTTTGTTAATGCCAAAGTTTGACATTCATGCATTTTTTGGCCTTGTTACTAAATACAAAGTTACCATTGCTCCTGTTGTGCCACCAATTGTTTTGGCTATTGCTAAGTCACCTGAACTTGATAACTATGACCTTTCATCCATTAGGGTCTTGAAATCTGGTGGGGCCCCACTTGGTAAAGAACTTGAGGATACTGTTAGGGCTAAATTTCCCCAAGCTAAATTGGGACAGGGATATGGGATGACTGAGGCAGGTCCAGTGTTAACAATGTGTTTATCATTTGCTAAAGAGCCAATAGATGTGAAACCAGGTGCATGTGGAACCGTTGTTAGAAATGCTGAGATGAAGATTGTTGATCCTGAAAATGATTCTTCTTTGCCTAGAAATCAACCTGGTGAAATTTGTATTAGAGGCGACCAAATCATGAAAGGTTATCTAAACAACCCGGAAGCAACAAGGGAAACAATAGACAAAGAAGGTTGGTTGCATACTGGTGACATTGGATTCATTGACGATGATGATGAGTTGTTCATAGTTGATAGACTTAAAGAATTGATTAAATACAAAGGTTTTCAAGTTGCTCCAGCTGAACTTGAAGCCATTATTCTTTCACATCCTCAAATTTCCGATGTCGCTGTCGTCCCAATGTTGGATGAAGCAGCTGGTGAGGTGCCAGTAGCATTTGTTGTAAGATCAAATGGAAGTATTGACACAACTGAGGATGACATTAAGAAGTTCGTCTCCAAACAGGTTGTGTTTTACAAAAGAATAAACAAAGTATTCTTCATTGATGTCATTCCCAAGTCACCCTCAGGCAAAATATTAAGAAAGGACCTAAGGGCTAAGCTTGCAGCTGGTGTTCCAAATTAA 1635 0.4055 MTIQTMEQEFIFKSKLPDIYIPKHLPLHSYCFENLSKYGSRPCLINAPTGEIYTYYDVELTARRVASGLNKLGIQQGDVIMVLLPNCPEFVFAFLGASFRGAIMTAANPFFTSAEIAKQAKASNTKLLVTQACYYDKVKDLENVKLVFVDSSPEEDNHMHFSELVQADEIEIEEVKVNINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSIAQQVDGENPNLYYHSEDVILCVLPMFHIYSLNSVLLCGLRAKASILLMPKFDIHAFFGLVTKYKVTIAPVVPPIVLAIAKSPELDNYDLSSIRVLKSGGAPLGKELEDTVRAKFPQAKLGQGYGMTEAGPVLTMCLSFAKEPIDVKPGACGTVVRNAEMKIVDPENDSSLPRNQPGEICIRGDQIMKGYLNNPEATRETIDKEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEAIILSHPQISDVAVVPMLDEAAGEVPVAFVVRSNGSIDTTEDDIKKFVSKQVVFYKRINKVFFIDVIPKSPSGKILRKDLRAKLAAGVPN 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00037 544 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 438 - -
Mepo2g00037 544 Gene3D - 5 437 IPR042099 -
Mepo2g00037 544 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 536 - -
Mepo2g00037 544 Pfam AMP-binding enzyme 33 443 IPR000873 -
Mepo2g00037 544 FunFam 4-coumarate--CoA ligase 2 439 541 - -
Mepo2g00037 544 CDD 4CL 21 534 - -
Mepo2g00037 544 Gene3D - 438 540 IPR045851 -
Mepo2g00037 544 Pfam AMP-binding enzyme C-terminal domain 452 528 IPR025110 -
Mepo2g00037 544 ProSitePatterns Putative AMP-binding domain signature. 187 198 IPR020845 -
Mepo2g00037 544 SUPERFAMILY Acetyl-CoA synthetase-like 13 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00037 Mepo-Chr2 384336 388807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00037 9 506 Monolignol Biosynthesis Gene Families AT1G51680 71.739 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00037 K01904 - gmx:547944 880.167