Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00029 ATGCCTGCCGTGTATGGAGGAGCTCGTATGACCACTTTCGAAGACTCTGAGAAGGAGAGTGAATACGGTTACGTTCGCAAGGTCTCTGGACCTGTCGTCATTGCTGATGGCATGAATGGGGCTGCTATGTATGAATTGGTTCGTGTTGGTAATGATAATCTCATCGGTGAAATTATTCGTTTGGAAGGGGACTCTGCCACTATCCAAGTTTATGAGGAGACCGCTGGATTAATGGTTAATGATCCCGTGTTACGTACTCACAAGCCTTTGTCAGTGGAGTTGGGACCTGGAATATTGGGAAATATTTTCGATGGAATTCAGAGGCCATTGAAAACTATCGCCAAAATATCTGCTGATGTCTATATTCCTCGTGGTGTGTCTGTTCCTGCACTTGACAAAGATACACTTTGGGAATTTCAGCCTAAGAAAATTGGTGAAGGAGATCTATTAACTGGTGGAGACTTATATGCTACTGTTTTCGAGAACAGTTTAATGGAACACCGTGTCGCACTTCCTCCTGATGCCATGGGAAAGGTTACCTATGTAGCACCAGCTGGTCAATATTCCTTGAAGGACACTGTGTTGGAACTTGAGTTTCAAGGTGTCAAAAAGAAGTTCACCATGCTTCAGAGTTGGCCTGTACGTACACCGAGGCCTGTTGCATCAAAACTTGCAGCTGATACTCCTCTTCTTACCGGTCAGCGTGTTCTTGATGCCCTTTTCCCCTCAGTACTTGGTGGGACCTGTGCCATACCTGGAGCTTTCGGTTGTGGCAAAACAGTCATTAGTCAAGCTCTTTCTAAGTATTCAAATTCTGATGCTGTTATTTACGTTGGTTGTGGGGAACGTGGAAATGAAATGGCAGAGGTTCTGATGGACTTTCCACAACTTACAATGACATTACCTGATGGTCGTGAAGAATCTGTCATGAAGCGTACGACACTTGTGGCTAACACTTCAAACATGCCCGTGGCTGCTCGTGAAGCTTCAATTTATACAGGAATCACTTTAGCAGAGTATTTTAGAGATATGGGTTACAATGTCAGTATGATGGCAGATTCCACATCTAGGTGGGCAGAAGCATTGCGTGAAATTTCAGGGCGACTGGCGGAAATGCCTGCTGATAGTGGATATCCTGCTTACCTTGCTGCACGTTTAGCCTCTTTCTATGAACGTGCTGGGAAAGTGAAATGTCTTGGAGGTCCTGAACGGACAGGTAGTGTAACAATTGTCGGCGCTGTTTCTCCACCTGGAGGAGATTTCTCTGATCCCGTGACATCTGCAACCCTCAGCATAGTTCAGGTTTTCTGGGGATTGGACAAAAAGCTTGCACAGAGGAAGCACTTTCCTTCTGTGAACTGGCTTATTTCTTACTCAAAGTATTCAACGGCACTTGAATCCTTTTACGAGCAATTTGATCCAGATTTTATAAACATTAGGACAAAGGCTCGTGAAGTTCTGCAAAGAGAAGACGATCTGAATGAAATTGTCCAGCTTGTGGGAAAGGATGCTTTAGCTGAAGGAGACAAGATCACCTTAGAAACTGCAAAACTTTTGAGAGAGGATTACCTTGCTCAAAATGCTTTTACACCATATGACAAGTTCTGTCCCTTTTACAAGTCTGTCTGGATGATGCGCAACATTATTCATTTCTACAATTTGGCAAATCAGGCAGTGGAGAGGGGAGCTGGTACTGATGGTCAGAAGATAACTTACACCCTCATCAAGCATCGTTTGGGAGATCTATTCTATCGTTTAGTGTCTCAGAAATTCGAGGATCCTGCAGAAGGGGAAGCCGCTTTGGTTGCCAAATTTACTCAGTTACATGAGGACTTGACTAACGGTTTCCGCAACCTTGAGGATGAAGCCCGATAA 1875 0.4443 MPAVYGGARMTTFEDSEKESEYGYVRKVSGPVVIADGMNGAAMYELVRVGNDNLIGEIIRLEGDSATIQVYEETAGLMVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKISADVYIPRGVSVPALDKDTLWEFQPKKIGEGDLLTGGDLYATVFENSLMEHRVALPPDAMGKVTYVAPAGQYSLKDTVLELEFQGVKKKFTMLQSWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDAVIYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGTDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEAALVAKFTQLHEDLTNGFRNLEDEAR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00029 624 ProSitePatterns ATP synthase alpha and beta subunits signature. 450 459 IPR020003 GO:0005524
Mepo2g00029 624 Pfam ATP synthase alpha/beta family, beta-barrel domain 26 86 IPR004100 GO:0046034|GO:1902600
Mepo2g00029 624 FunFam V-type proton ATPase catalytic subunit A 135 206 - -
Mepo2g00029 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 463 IPR027417 -
Mepo2g00029 624 CDD ATP-synt_V_A-type_alpha_C 476 582 - -
Mepo2g00029 624 Gene3D - 460 610 IPR024034 -
Mepo2g00029 624 FunFam V-type proton ATPase catalytic subunit A 21 90 - -
Mepo2g00029 624 Hamap V-type ATP synthase alpha chain [atpA]. 20 623 IPR022878 GO:0046034|GO:0046961
Mepo2g00029 624 Pfam ATPsynthase alpha/beta subunit N-term extension 103 224 IPR031686 -
Mepo2g00029 624 CDD V_A-ATPase_A 89 461 - -
Mepo2g00029 624 Gene3D - 135 206 - -
Mepo2g00029 624 Gene3D - 92 458 IPR027417 -
Mepo2g00029 624 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 10 622 IPR022878 GO:0046034|GO:0046961
Mepo2g00029 624 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 18 90 IPR036121 GO:0046034|GO:1902600
Mepo2g00029 624 FunFam V-type proton ATPase catalytic subunit A 193 458 - -
Mepo2g00029 624 FunFam V-type proton ATPase catalytic subunit A 460 613 - -
Mepo2g00029 624 CDD ATP-synt_V_A-type_alpha_N 22 88 - -
Mepo2g00029 624 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 233 459 IPR000194 GO:0005524
Mepo2g00029 624 NCBIfam V-type ATPase subunit A 21 612 IPR005725 GO:0016887|GO:0033180|GO:0046961|GO:1902600
Mepo2g00029 624 Gene3D - 21 90 IPR023366 -
Mepo2g00029 624 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 472 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00029 Mepo-Chr2 304038 309481 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00029 1 624 Primary Pumps ATPases(2) AT1G78900 93.109 0.0 1205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00029 K02145 - gmx:100775727 1204.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g00029 2 304038 309481 Mepo2g00029 2 304038 309481 ECH