Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00013 ATGCACCTCAACCACAACCTCTCGTGGTTGTGGATTGTTGTTTTGATCTCAACCGCCTCAGTACAATGCAAAACCTCCTCCCAAGATGTTTCAGCCCTTAATGTAATGTACACCAGCTTGAATTCTCCTTCTCAACTCTCTGGCTGGAAATCAAGCGGAGGTGATCCTTGTGGTGAAAATTGGGAAGGAATCAAATGCTCCGGCTCATCTGTCACAGAAATAAATTTATCTGATCTGGGACTTAGTGGATCATTGGGCTACCAGTTATCACAGTTAACATCTGTTACCGACTTTGATTTGAGCAACAACAATTTCAAGGGTGACATACCGTATCAACTCCCTCCAAATGCTCGTAACGTAGATCTTTCTAAGAATGCGTTCACTGGAAACATACCTTACTCCATTGGTCAGATGAAAGAACTAACTTCTCTAAATCTTGCACATAACAAGCTCAATAACCAGCTGGGGGATATGTTTACGAGCCTCACTAAACTCAAACAATTGGATGTATCATTCAATTCACTGTCAGGAGAACTGCCTCAGAGTTTGAAATCAGCAACGAGCCTCAAGAAGATATATCTGCAAAACAATAAATTGTCTGGTTCAATAAATGTCCTTGCCTACCCTCCACTTGACGATGTGAATGTTGAGAACAACAAATTTACTGGTTGGATTCCTGAGGAGTTAAAGGATATAAATAGTTTGCAAACTGGAGGAAACTCTTGGAAAACTGGGCCAGCACCACCTCCTCCTCCCGGTACACCTCCTATCAAGCACCATTCCGAGGAAAAGGAAGGAAAATCATCAAATTCTCTTGTTACTGGATTGATTATAGCTGGCATTGCTTTTGGTGCGCTGGTCGTAATCATACTCGTTGCTGCTCTTTTTAAAAGAAAGTCATCATATGCTTCTTCACGTTTTATTGATGAAGAGAGGCGTAGCCAGCACAGATCCTTTACACCCCTTGCATCTCAGGAGTTGACTAAAGATTTAGGTGGTAATGACACGCAATACAAAGGATTTAAGGCAATGGATTCAACTTCAATTGACATAATGGCTTTACAAAAAAATCCATCAGTTAGGTCATCAGTCTCTGATTGTGTCCAAACCTTTAATGACAATGAGTTTGCAAATCGTCTAAATTCTAGAAAAAGCACATCAATCCGCTGTACTGCTTTTTCATTGGGGGAGTTGCAAACTGGTACTGCTAACTTTGCTTCAGGCCGACTTCTTGGTGAAGGATCCATTGGACCTGTTTATCGTGCCAAATATGCTGATGGAAAGGTACTGGCTGTAAAAAAATTAAACCCTTCACTTATTGATGAGGGTTCTCCTGAGGAATTCACTCAGATTCTATCAAGCATGTGCAAACTTCGTCATCCAAATATTGCGGAGCTTGTTGGCTATTGTTCAGAACAGGGGCACATGTTAGTATATGAGTATTTCAGAAATGGTTCTCTCCACGACTTTTTACACTTATCAGATGACTTCAGCAAACCACTAACTTGGAACACCAGAGTCAGAATCGCATTGGGCACTGCTCGGGCTGTTGAGTACCTACATGAAGCTTGTTCTCCGCCTGTACTTCACAAGAATATCAAATCTGCCAATATTTTGCTTGACACAGATTTGAATCCCCGTCTCTCAGACTATGGTTTGGCATCCTTCCACCAGCGTACTAGCCAAAATCTTGGGGCAGGATATAATGCACCAGAATGCACAAAACCATCAGCCTATACCCTGAAGAGCGATGTATACAGTTTTGGGGTAGTGATGCTCGAACTTTTTACAGGTCGAATGCCTCTAGACAGTTCAAAGCCAAAATCAGAGCAAAGCCTCGTTCGTTGGGCTACGCCACAGCTTCGTGACATAAACGCTGTGGAAAAGATGGTAGACCCTGCATTGCGGGGACTTTACCCTCCTAAATCACTCTTTCGATTTGCTGACATCGTCGCCCTTTGTGTTCAGTCTGAGCCCGAATTTCGGCCATCTGCATCAGAGGTGGTTCAGGCATTGGTGCGATTAGTTCAACGTTCAAGTTTGAAAATGAGAGAGGATCTTGGTGCATGTGGTCGGACAGATGATTATGATGATTGA 2097 0.4273 MHLNHNLSWLWIVVLISTASVQCKTSSQDVSALNVMYTSLNSPSQLSGWKSSGGDPCGENWEGIKCSGSSVTEINLSDLGLSGSLGYQLSQLTSVTDFDLSNNNFKGDIPYQLPPNARNVDLSKNAFTGNIPYSIGQMKELTSLNLAHNKLNNQLGDMFTSLTKLKQLDVSFNSLSGELPQSLKSATSLKKIYLQNNKLSGSINVLAYPPLDDVNVENNKFTGWIPEELKDINSLQTGGNSWKTGPAPPPPPGTPPIKHHSEEKEGKSSNSLVTGLIIAGIAFGALVVIILVAALFKRKSSYASSRFIDEERRSQHRSFTPLASQELTKDLGGNDTQYKGFKAMDSTSIDIMALQKNPSVRSSVSDCVQTFNDNEFANRLNSRKSTSIRCTAFSLGELQTGTANFASGRLLGEGSIGPVYRAKYADGKVLAVKKLNPSLIDEGSPEEFTQILSSMCKLRHPNIAELVGYCSEQGHMLVYEYFRNGSLHDFLHLSDDFSKPLTWNTRVRIALGTARAVEYLHEACSPPVLHKNIKSANILLDTDLNPRLSDYGLASFHQRTSQNLGAGYNAPECTKPSAYTLKSDVYSFGVVMLELFTGRMPLDSSKPKSEQSLVRWATPQLRDINAVEKMVDPALRGLYPPKSLFRFADIVALCVQSEPEFRPSASEVVQALVRLVQRSSLKMREDLGACGRTDDYDD 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00013 698 Gene3D Transferase(Phosphotransferase) domain 1 482 690 - -
Mepo2g00013 698 Pfam Leucine rich repeat 115 175 IPR001611 GO:0005515
Mepo2g00013 698 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 370 481 - -
Mepo2g00013 698 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Mepo2g00013 698 Gene3D Phosphorylase Kinase; domain 1 365 481 - -
Mepo2g00013 698 SUPERFAMILY Protein kinase-like (PK-like) 383 672 IPR011009 -
Mepo2g00013 698 ProSiteProfiles Protein kinase domain profile. 405 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g00013 698 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 26 253 - -
Mepo2g00013 698 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 482 686 - -
Mepo2g00013 698 Pfam Protein tyrosine and serine/threonine kinase 408 672 IPR001245 GO:0004672|GO:0006468
Mepo2g00013 698 PANTHER LEUCINE RICH REPEAT KINASE 2 14 141 - -
Mepo2g00013 698 MobiDBLite consensus disorder prediction 235 266 - -
Mepo2g00013 698 SUPERFAMILY L domain-like 24 236 - -
Mepo2g00013 698 Gene3D Ribonuclease Inhibitor 23 251 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00013 Mepo-Chr2 120736 126640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00013 3 697 Strubbelig Receptor Gene Family AT1G78980 61.878 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mepo2g00013 PK_Tyr_Ser-Thr 2.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00013 - - psat:127107173 1130.55