Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00004 ATGCACACTATTGCATTTTCTAACATGTATAAACTCATATTCAGCTCTTGCATTGCATACTTTCTTCTTTTATCTCTCTTGTTTGTGCATGGCAAAGAACTATCATGCAATCAAACTCCATACCCTCATGTGTGCAACCATTATATTGGAACCACGGCCATAAATACACAATCAACACTAGATTCTTCATCATCTGATTCTTCCTTCCATGATATTGCACTTAAGGTTGCCTTGGACCAAGCCATTGAAGCACACAAACTTGTATCAACCATGGAATTAAATAATTTCAAAGACAAGCATGCTAAATCAGCATGGGAGGATTGTTTAGAGCTTTATGAGGATACAATTTATCAACTCAAACGCTCCATAAACTCAAACAACATAAATGACAAATTAACTTGGCAAAGTGCTTCCATTACCAATCATCAAACTTGTCAAAATGGTTTCATTGATTTCAACCTTCCCTCTCACTTAAACTACTTCCCATCCATGTTAAGCAACTTCACTAAATTGCTTAGCAATTCCTTGTCCATTAGCAACACTCTAACTTCTTCACTATCATCCTCGTCCACATCATCGACTACTAAACAAAATGGAGGGAGAAAGTTGTTATCAGATAGATTTCCATATTGGCTTTCAAGGTCAGATAGAAAGCTTCTTCAGGCAACACCGGGGTCAGGGACAGGACCAAGAGCTGATATTGTGGTTGCACAAGATGGAAGTGGGAACTATAAGACACTATCCGAGGGTGTGGTTGCAGCTGCTAAGCTTAGTGGAAAAGGGAGAGTTGTTATTCATCTGAAAGCAGGTGTTTATAAAGAGAATGTTGATATCAAAAGAATTAACAGTGACAAATTTAATGATATTTGGAGATGGAATGAATTCTACTATTGTCACTGGTAA 903 0.3754 MHTIAFSNMYKLIFSSCIAYFLLLSLLFVHGKELSCNQTPYPHVCNHYIGTTAINTQSTLDSSSSDSSFHDIALKVALDQAIEAHKLVSTMELNNFKDKHAKSAWEDCLELYEDTIYQLKRSINSNNINDKLTWQSASITNHQTCQNGFIDFNLPSHLNYFPSMLSNFTKLLSNSLSISNTLTSSLSSSSTSSTTKQNGGRKLLSDRFPYWLSRSDRKLLQATPGSGTGPRADIVVAQDGSGNYKTLSEGVVAAAKLSGKGRVVIHLKAGVYKENVDIKRINSDKFNDIWRWNEFYYCHW 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00004 300 SUPERFAMILY Pectin lyase-like 227 280 IPR011050 -
Mepo2g00004 300 PANTHER PECTINESTERASE 22 279 - -
Mepo2g00004 300 Gene3D - 182 292 IPR012334 -
Mepo2g00004 300 NCBIfam pectinesterase inhibitor domain 35 183 IPR006501 GO:0004857
Mepo2g00004 300 Pfam Plant invertase/pectin methylesterase inhibitor 35 178 IPR006501 GO:0004857
Mepo2g00004 300 SMART PMEI_2 24 178 IPR006501 GO:0004857
Mepo2g00004 300 Pfam Pectinesterase 233 280 IPR000070 GO:0030599|GO:0042545
Mepo2g00004 300 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 183 IPR035513 -
Mepo2g00004 300 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 181 IPR035513 -
Mepo2g00004 300 CDD PMEI-like_3 34 180 - -
Mepo2g00004 300 FunFam Pectinesterase 33 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00004 Mepo-Chr2 33518 34420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00004 11 280 Carbohydrate Esterase AT1G23200 41.356 4.28e-54 182