Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g00001 ATGATTTCTTTTCGCATATACTACAAGAGACACCAAGTTTCACATAATCTGAGCAAGCTGGGTGCTTATTCAAGAATAAAGCAGGAACTAGAGTCAAAGAAACAAGAATTCAGCTATGAAGAAGTATTAAACATTACCAGAAACTTTGAAAAGGTTGTGGGGAAAGGAGCATCTGGAACAGTCTACCATGGCTGGATTGATCATGATACTGAGGTAGCTGTCAAAATGCTATCTTCCTCATCAACTCAAGGATATCTGCAATTTCAAGCAGAGGCCAAACTTTTTGCTGTAGTTCATCATAAATACTTGACAGGTCTTATAGGGTATTGTGATGATGGCACCAACATGGCTCTAATCTATGAGTATATGTCTAATGGAGACTTAGCCAAGCACTTATCAGATGATAGTATTCATTGA 417 0.3789 MISFRIYYKRHQVSHNLSKLGAYSRIKQELESKKQEFSYEEVLNITRNFEKVVGKGASGTVYHGWIDHDTEVAVKMLSSSSTQGYLQFQAEAKLFAVVHHKYLTGLIGYCDDGTNMALIYEYMSNGDLAKHLSDDSIH 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g00001 138 Pfam Protein tyrosine and serine/threonine kinase 49 134 IPR001245 GO:0004672|GO:0006468
Mepo2g00001 138 SUPERFAMILY Protein kinase-like (PK-like) 27 136 IPR011009 -
Mepo2g00001 138 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Mepo2g00001 138 FunFam receptor-like protein kinase FERONIA 11 122 - -
Mepo2g00001 138 Gene3D Phosphorylase Kinase; domain 1 28 122 - -
Mepo2g00001 138 PANTHER OS07G0107800 PROTEIN-RELATED 12 130 - -
Mepo2g00001 138 ProSiteProfiles Protein kinase domain profile. 47 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g00001 Mepo-Chr2 15219 16211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g00001 32 133 Receptor kinase-like Gene Family AT1G51890 61.765 5.72e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mepo2g00001 PK_Tyr_Ser-Thr 2.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g00001 - - psat:127087401 246.899