Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo28g00002 ATGGCTTTAAATAAGACAGGGAACTTGATAGGTAACAACACCGGAGACGAGCATCGTTTGTTTCCTCAATACACCCAACCAGAAGTACGCAGTGGTGCTGCAGATGTACATAATAATATCCCTAAACAGGTTGGGGGGAAAATTTCTGTGAGTAATGTTCGTGATGGAGTTGGTGGTGGAAGAGTTCTTGATACATCTCGAAATCGTGAGAGTAGGTTTGGGTTGAATAGGGAGAACGGACATGTGAGATACGAAGATCTTACCAATATTTTAGGGTTGAAGAGAATGGACTCTGAGAGTTTTTCTGATATAAGTGACTTTATCCCTAACAATCAGCCAGCAGCACAAGTGATAGAAAACGGCGTTTCTCCGAACATTTTAAGCAAAACTCAAAAAGGAGACGGCGAAAACAGTGGCCTTGGTGCGTTGAGGAAGACCTTTAGTGAAACAATTGTTTGCGACAAAGCCGGTACTAGACAAGGCGTATCATCGCCCATTTACAGACATGAAAGATCTCACTCCAATGGGTTTTCCGGTTCTGGAACTTTAGACGATTCTTTGTCTGGTGGGAAAATGAAGTTTCTTTGCAGCTTCGGCGGAAAAATATTACCAAGGCCAGGTGATGGTAAACTCAGATATGTTGGTGGAGAAACTCACATTATATCTATTCGAAATGATATTTCGTGGCAAGAGCTTATGAACAAGACTTTAGGTATTTGCAGTCAGCCTCACACGATAAAATACCAACTTCCAGGGGAAGATCTCGATGCTCTTATATCTGTTTCCTCCGACGAGGATCTTCAAAATATGATAGAGGAATACCATGGACTTGAAAGTCATGAAGGTTCTCAGAAACTTCGAATATTTTTAGTTCCTTTGGGTGAATCTGAAGAGTCACCGTCAGCCGATGGAAACACCGTTCTGCAGAATGACCCTGATTATCAATACGTTGTTGCTTTAAACGGCGTAATAGACCATAGTCCTAAGAAAAACATCAGTGGACCGAATTTGATCAACGAAGCAAATCATTCAGCGAAAACTTTCAATTTCACCCCAACAGTTACCTCTTCTCCTTTGGAGATCAGGGATGGTAATAATGGTATGAATGCTTTAAATCTTCAAAGTCCGTTGCGAATTTCTCCTACTCCAGTTCAAGTTGCAGGTTCTAATACAGGTTATATTCAATTGCTCGGTAACAACTCATGCCAGGGAAGTATTGACAGCAATGCGTCATTTGTTACCGCTCAGATATACTCCGGAAACTCGAGCATTAACACTGCTGATTGCAGATACCTTCAACAACCATCTGCTACTTTGGTAAGTGACAGTCATCCTCGTCAACACGGCAACGTTGGTCAGCCCAAGAATCTCAATGGACAGTATTTTGACAACTACAGTACTGTATATGCTAGCCAAAGTAATGGTTACGGTGATGAAGCTCTCGGTGGAACTTTGCATAAGGATACAATATTCTACTCTGGAAATTCAATCGCTCAACAGATCGAATCTTATGGAACTAATAATGATCCGCCTCATGGGATGCCTCATGCTTTTTCTGATTCGCAGTTGCATGAAAGTGGAGCAAAGTCTGGTTACTGCTCACAAGAAGGAATTACCCCATCTCTCTCCTTGAACCATGAAAAGTCTCAATTATCTTCGTTGTTAGGTGTCTCGAAAGTGAACCTTACGGAGGGTCAACACGATCCCTTTCTCCATTATCCTCAAGTACAAAGTAAGATACCAAATGTGGAGTCGACTGAGATGCACAGATGGCAAGGTGCTGCATCTTCTTCCAACTCAGAATCAGTAAGAACGGGTGATCGTATTAATAAGGACAGCATTTTATCTGAAAAAAACACCTTAAGTGGATCTGGCTTTGTAGAAAAGGAGGACGTGCGAGAAAATTCTTTGAAATCAGAAAGGATGATGATAAATGAAGAAAAGAATCCTATTCTTAAGAAGGATAACAAGGTTTACGAGGGAAATCCAACTGTTGATTATATGAGTGAATTGTATCTTTTGGATACATTCCCTACTGATAACGTAAGTGCTAAGATTGGTGTGCAAAATAATTGGGAACAACCTTGTGCGGACACGCATCCTTCGTCATCAGGCATGATGGGATTCTCGCTAAATAACCTTATGGACAAGACCCCGTCTGATCTTCATAACATCGGCCAAAAGACAAGTGATGGAAGAAACATTGATTTTTCAGCCAGAAACATCAATTTAAATTCTCCAATCCCAAAATGCGCAGAAAGCCCGTGTGACAAAAGTTCTGAAAGAGATCACATGTTCAAGTTTTCCTTTGATCCACATTCTCTTAAATCTGCACAAATTCAGCCTTCTCAGAATCAGATCACTACAGGTTTTCACGATAATCCAGCAATAAACTCTGAAAGTTTGTATCCTGCGGTACTTCATGATGATGTCCGTCCAAATTTGAACTTGCCGGTTGATGGCCTGGATAATTCAAGCAAGAATATATCTTTTGTAAAGGCACCTTCGTTTCTCGATGACTTGATTACAAGCATTGATCAAACGGTTGGTCAGTTTAAACATGAACATTCTGCCTCTGGACTGTCAAAAGTTGAAGGTGTAATTTTAGAACAATCAAAAACTTCAGAAAGATGTAATGATGCAAATCGAGTGGAGCCGTTTCTTGTAGTAGACGATGTAACCGGTGTTGTTCCTTCACGTCCCATGTCTTCACCAGTGCACACCTCGCATGATTTTGATGAAGTTGGAAGCGATGTATCTCCATCTCATACAGAAGTCGAGAGCACCGTTCCAGAGTCAGATCCTGAGGATTTTAAAGACGACCAAACCGACGTGAATGACTTCCTTTCCGATGCAATGATAGCAGAAATGGAGGCCAGCATATATGGTTTGCAGATAATTAGGAATGCTGATCTTGAAGAACTTATGGAGTTAGGATCTGGTACCTATGGAACTGTTTATCATGGAAAATGGCGAGGAACCGATGTAGCCATCAAGAGAATTAAAAAGAGCTGCTTTGCTGGAAGATCTTCTGAGCAAGAACGGTTGGCAAGAGATTTCTGGAGAGAGGCACAGATCCTGTCGAATCTTCACCATCCCAATGTGCTCGCATTTTATGGAATCGTACCGGATGGTGCTGGTGGAACCTTAGCAACTGTAACAGAATATATGGTTAACGGCTCCCTTAGGCATGTCCTTGTCAAGAACTACAGATTACTAGATCGTCGTAAAAAGCTTATAATTGCCATGGATGCAGCCTTTGGTATGGAATATTTGCACTCAAAGAATATTGTCCATTTTGATTTAAAGTGTGACAATTTGCTCGTCAATCTAAGGGATCCTCAACGACCAATATGCAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGTAATACCCTTGTATCTGGTGGTGTCCGAGGAACCCTTCCATGGATGGCACCTGAGCTGTTGAATGGTAATAGCAGCCGGGTTTCAGAAAAGGTTGATGTTTTCTCGTTTGGCATCTCCATGTGGGAGTTATTGACAGGAGAGGAACCTTATGCAGATATGCACTGCGGTGCCATTATTGGGGGCATTGTAAAGAACACCCTTCGACCACCGATTCCAGAACGATGTGATCCTGAATGGAGGAAACTTATGGAAGAATGTTGGTCACGTGAACCCGAATGTCGGCCATCGTTCACCGAGATAACAGGAAGATTAAGATCTATGTCTATGACCCTTCAAGGAAAGGGAAATTATCAGGCATGGCAGTTGAGACCTAGTAATGAACTTTGA 3780 0.4172 MALNKTGNLIGNNTGDEHRLFPQYTQPEVRSGAADVHNNIPKQVGGKISVSNVRDGVGGGRVLDTSRNRESRFGLNRENGHVRYEDLTNILGLKRMDSESFSDISDFIPNNQPAAQVIENGVSPNILSKTQKGDGENSGLGALRKTFSETIVCDKAGTRQGVSSPIYRHERSHSNGFSGSGTLDDSLSGGKMKFLCSFGGKILPRPGDGKLRYVGGETHIISIRNDISWQELMNKTLGICSQPHTIKYQLPGEDLDALISVSSDEDLQNMIEEYHGLESHEGSQKLRIFLVPLGESEESPSADGNTVLQNDPDYQYVVALNGVIDHSPKKNISGPNLINEANHSAKTFNFTPTVTSSPLEIRDGNNGMNALNLQSPLRISPTPVQVAGSNTGYIQLLGNNSCQGSIDSNASFVTAQIYSGNSSINTADCRYLQQPSATLVSDSHPRQHGNVGQPKNLNGQYFDNYSTVYASQSNGYGDEALGGTLHKDTIFYSGNSIAQQIESYGTNNDPPHGMPHAFSDSQLHESGAKSGYCSQEGITPSLSLNHEKSQLSSLLGVSKVNLTEGQHDPFLHYPQVQSKIPNVESTEMHRWQGAASSSNSESVRTGDRINKDSILSEKNTLSGSGFVEKEDVRENSLKSERMMINEEKNPILKKDNKVYEGNPTVDYMSELYLLDTFPTDNVSAKIGVQNNWEQPCADTHPSSSGMMGFSLNNLMDKTPSDLHNIGQKTSDGRNIDFSARNINLNSPIPKCAESPCDKSSERDHMFKFSFDPHSLKSAQIQPSQNQITTGFHDNPAINSESLYPAVLHDDVRPNLNLPVDGLDNSSKNISFVKAPSFLDDLITSIDQTVGQFKHEHSASGLSKVEGVILEQSKTSERCNDANRVEPFLVVDDVTGVVPSRPMSSPVHTSHDFDEVGSDVSPSHTEVESTVPESDPEDFKDDQTDVNDFLSDAMIAEMEASIYGLQIIRNADLEELMELGSGTYGTVYHGKWRGTDVAIKRIKKSCFAGRSSEQERLARDFWREAQILSNLHHPNVLAFYGIVPDGAGGTLATVTEYMVNGSLRHVLVKNYRLLDRRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGNSSRVSEKVDVFSFGISMWELLTGEEPYADMHCGAIIGGIVKNTLRPPIPERCDPEWRKLMEECWSREPECRPSFTEITGRLRSMSMTLQGKGNYQAWQLRPSNEL 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo28g00002 1259 Pfam PB1 domain 208 292 IPR000270 GO:0005515
Mepo28g00002 1259 MobiDBLite consensus disorder prediction 593 615 - -
Mepo28g00002 1259 Gene3D Transferase(Phosphotransferase) domain 1 1060 1256 - -
Mepo28g00002 1259 CDD PB1_UP2 195 290 - -
Mepo28g00002 1259 Pfam Protein tyrosine and serine/threonine kinase 975 1234 IPR001245 GO:0004672|GO:0006468
Mepo28g00002 1259 ProSiteProfiles Protein kinase domain profile. 972 1242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo28g00002 1259 SMART PB1_new 206 293 IPR000270 GO:0005515
Mepo28g00002 1259 CDD STKc_MAP3K-like 978 1235 - -
Mepo28g00002 1259 PRINTS Tyrosine kinase catalytic domain signature 1054 1067 IPR001245 GO:0004672|GO:0006468
Mepo28g00002 1259 PRINTS Tyrosine kinase catalytic domain signature 1206 1228 IPR001245 GO:0004672|GO:0006468
Mepo28g00002 1259 PRINTS Tyrosine kinase catalytic domain signature 1162 1184 IPR001245 GO:0004672|GO:0006468
Mepo28g00002 1259 PRINTS Tyrosine kinase catalytic domain signature 1091 1109 IPR001245 GO:0004672|GO:0006468
Mepo28g00002 1259 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1097 1109 IPR008271 GO:0004672|GO:0006468
Mepo28g00002 1259 PANTHER SERINE-THREONINE PROTEIN KINASE 236 1238 - -
Mepo28g00002 1259 MobiDBLite consensus disorder prediction 899 941 - -
Mepo28g00002 1259 SUPERFAMILY Protein kinase-like (PK-like) 960 1232 IPR011009 -
Mepo28g00002 1259 SUPERFAMILY CAD & PB1 domains 208 294 - -
Mepo28g00002 1259 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 965 1059 - -
Mepo28g00002 1259 Gene3D - 210 292 - -
Mepo28g00002 1259 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1060 1251 - -
Mepo28g00002 1259 SMART serkin_6 972 1241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo28g00002 1259 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 211 293 - -
Mepo28g00002 1259 Gene3D Phosphorylase Kinase; domain 1 965 1059 - -
Mepo28g00002 1259 ProSitePatterns Protein kinases ATP-binding region signature. 978 1003 IPR017441 GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo28g00002 190 321 MAP Kinase Kinase Kinase AT1G16270 62.500 1.69e-42 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Mepo28g00002 PK_Tyr_Ser-Thr 3.5e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo28g00002 - - gmx:100790135 1528.84