Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo25g00080 ATGGCACCAAGAAGAAGAGTTAGCAAAAGGGTTTGCACCATTCGTTCTGTTCGTGCTCCTGATGGAAGTGCCTTTTTCAAATGTGGAACATGTGGGATGTCTGTTGCTATTGCCTTGGCTGATATGCATTATTGTGACTCCAACAAGATTCAATTCAAAAGGTTACTCGGAATCGTTCCCAAGCGAACTCGCCCAAACATTCAACGTTTGATGAAGAGCCAACCTATTTCGCCTTATCGCCTTTTTATGGAAAGCTTCATGAAGGGTCAAGACATGGAAAATTATAATATTGAACTTGATAGGATAGGGTTTGAAAAGTGGAAAAATATGTCAAAGGAGGAGAAGCAACCCTTTGTTTCTCATGCTAGAGAATTGGACAATAAGCACCAAGAAGCTTTGAAACAGGATGCTATTGGGATCATTAAGATAAAGTATGGAGCAGATTCACCACTGATTGAGATTCTTGATGAGGTTATTAAGCTGGATTCGTGGAGTCGAATTAGTCTTCTGTGTTTGTTTATGATATGCACTGCAGTCTGCAAGGCTGTTTTGTTCGTAGCTCTGTGA 567 0.4056 MAPRRRVSKRVCTIRSVRAPDGSAFFKCGTCGMSVAIALADMHYCDSNKIQFKRLLGIVPKRTRPNIQRLMKSQPISPYRLFMESFMKGQDMENYNIELDRIGFEKWKNMSKEEKQPFVSHARELDNKHQEALKQDAIGIIKIKYGADSPLIEILDEVIKLDSWSRISLLCLFMICTAVCKAVLFVAL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo25g00080 188 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 72 137 IPR009071 -
Mepo25g00080 188 Gene3D High mobility group box domain 72 137 IPR036910 -
Mepo25g00080 188 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 4 136 - -
Mepo25g00080 188 Pfam HMG (high mobility group) box 77 134 IPR009071 -
Mepo25g00080 188 CDD HMG-box_CMB1-like 72 133 - -
Mepo25g00080 188 SUPERFAMILY HMG-box 73 135 IPR036910 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mepo25g00080 HMG_box 1.4e-05 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo25g00080 - - psat:127115600 171.014