Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo25g00062 ATGTCACTGGGGAAAATTCACCGTCTGGAGATAGAGAATTTCAAGTCATACAAAGGTTCCCAAATCATCGGTCCCTTCGCTGGCTTCACAGCCATCATCGGCCCTAATGGCGCCGGTAAATCAAACCTAATGGACGCTATCTGCTTCGTTCTCGGCGTTAGAACCATTCACCTCCGTGGTTCTCAACTAAAGGATCTTATCTACGTATTCGATGACAGCGGGAACCAGAAGAAAGAACGTTCTGCCTTGGTTCGCTTGGTTTATCAACTCGCTGACAAATCTGAGATTCAATTTGCAAGAACCATCACTGCCACAGGCGCAAGTCACTACTTCATCGACGGTATTGTGGTTACCTGGGATGTCTACAATGCTAAACTCATATCTCTTGACATTCTTGTCAAAGCTAGCAATTTCTTGGTCATTCAGGGTGAGGTGGAATCCATTGCATCGAAAAATCCAAAGGAACTTACTTTACTTTTCGAACAGATATCTGGCTCGGATCAATTCAAGAGAGAGTACGACAAGTTGGAAAAAGAAAAAAACTCTGCAGAGGAGAAATTGGCGCTTGTTTATCAGAAGAAAAAGACTATTTTGATGGAGAAAAAGAAGAAGAAAGAACAAAAGAAAAAGGCAGAGCAACATCTTCGGTTGCAAGGCGAATTGAAATCTATGAAAAGGGAACATTTCTTGTGGAAGTTGTTCAATATAGAGAATGATTTTGCTAAAACCACCGAGGAACTTGAAGTTGATAAAACAAGCTGTGAAGGTGTTGGTAAAGAGGTAGAAAAATTTGAACATGAAGCCAATGAAAAGGAAAAAGAGCTAGCCAATTGTGTTGAAGAGATTAAGCTACTTGAGGAGAAAATAACTGAGATAAGCAACAAACTTGATGACAAGACTCGACCCGATGTTATCAAGTTAAAGGAGGAAATATCTCGTATCAATTTGAAAATTGAAAAAGCGAAGAAGGAGCTATGCAAAAAAGGTGAAGAACGAAAGAGGCATGCTAATGATATAGCAATTCTACAGAGAAGTATTTGGGATCTTAAGGCGAAAATGGATGACCTACAGGAAAAGGGTCGAAATGTTGGTGGTCAGATTAAGTTAGATGGCAATGACTTGGAAGAATATAGTAGAATAAAAGAGGAAGTTATGATAAAAACTGCAAATCTTAGAGAGAAAAAAGAACTTCTTGATGGGCAGCAACGTGCTGATAGTGAAGCTCAAACTAATTTGGAAGAAACTCTTCAACAATTAAAAAACCGGGAGTCGGAGCTGGATTCAAAGGAAAAACAGATATATGAAAACGAGAGAGATGCTAAGTTTGCTGATACTGTGGCGACTCTAAAACGCTTGTTCCAAGGAGTCCATGGTCGCATGACTGATCTTTGTAGACCAACACAGAAGAAGTATAATCTAGCCGTTACCATTGCAATGGGTAGATTAATGGATGCAATTGTTGTTGACGATGAAAATACCGCGAAGGAATGCATCAGACATTTAAAAGAGCTGCGGTTTCCTCCCGACATTTATTCCTCTACATTTGATCCTTCCTTGGAGAGGGCAATTCTCTTTGCTGTTGGGAACACTCTTGTTTGTGAAGATCTTGAGGAGGCCAAAATTTTAAGCTGGACTGGTGAGAGGTTAAAAGTTGTAACTGTGGACGGAATTCTGCTGACAAAATCTGGCACAATGACTGGTGGCACTAGTGGTGGAATGGAAGCAAGGTCAAAAAAGTGGGATGCCAAGAAATTTGAAGAATCCTCCCAGAAGAAAGAGAAGTATGAATCGAAGTTGGAAGAGCTAGGATCAATTAGAGATATGCATCATATTAAAGTGTCTGAAGTAGAGGAAAAAATCAGCGAACTCAAGAAGAAAGCTCAATATGCTGAGATTGAAAAGCAATACATCGAAAATAAGCTTCCAACATTGAGCGATGAAAAGGGGACTATCAAAAAACAAATTGAACGAGTTAGTCCAGAACTGATCAAGTTAAGAGATGCTGTTGAAAAGAGAAATGCAGAAATACGCGAGCTTGAGAAGAGTATAAATGAAATCACTGATGAGATATACAAAGACTTCAGCAAGTCAGTTGGGGTTGCAAACATTCGCGAGTTTGAAGAAACTCAACTCAAGGCTTCTCAAAATGCAGCAGAGGAGAGACTGAACCTGAGGAGCCAACTTTCAAAATTAAAATATCAGTTGGAGTATGAGCAAAATCGGGACATGAGTTCTCGAATTCAAGAATTGGAATCTTCGCTGAGTGCTTTAAAGAATGATTTAAAGGGGCTACAGAACAAAGAGGCCAAAGCAAAGTTAGCAGTGGAGAATGCTACTGAACAGATAAATCAGTTGAAGGGTGAATATAAAGAGTTGAAATCCAAGTCAGAGGATTCTGAAAAGGAAATTCAGGAACGGAAGAAGAGGGCTTCTGCAGCCAAAATAAAATTATCACAACTTAATCATCAGATTAAGTCAAAGGAGGAATGGATCGAGAAGTTAATGGGGCAAAAGCAGGAAATACAAGACAAGTGTAAGCTGGAGCAGATTAGCCTTCCAATCATATCAGATCCTATGGATACCGATAGCTCAACAGGTCCAGTTTTCGACTTTGATGAGCTCAGTAGGACACTGAGAAATAGGAGACACTGTGACAGGGATAAAATAGAGGTAGAATACAAGCAAAACATGGATGCGCTGATGTCTAAGATCGAAAGTACAGCGCCAAATTTGAAGGCATTGAAACAGTATGATGCCCTGGTTGAAAAAGAAAGACTTATAACTGAAGAGTTTGAAGCTGTCATGAAAGAAGAGAAGGAAAAAACAGGTAGATTCAATGTGGTAAAGCAGGAGAGATATAATTTGTTCATGGGTGCTTTCAACAATATATCTGGTAATATAGATAAAATCTACAAACAACTTACAAAGAGCAACACACATCTTCTTGGTGGAACAGCATACCTATATTTGGAAAATGAAGACGATCCATTTCAACATGGCATCAAGTACACTGCTATGCCTCCCACAAAGGCATTCTACGACATGGATCAACTTTCTGGTGGCGAAAAGACAATTGCTACGCTTGCGTTGATATTCTCCATTCATAGTTATAAGCCTTCACCATTTTTCATACTTGATGAAGTTGATGCTGCATTGGACAACTTGAATGTTGCGAAAGTTGCTAGCTTTATTCGTTCAAAATCTTGTGAAGGAGCGAGGGCTAATCAAGATACCGATGTTGGAAAGGGTTTTCAGATAATTCAAATATCACAGAAAGATCACTTCTATAACAACGCTGAAGTGTTAGTCGGGGTTTGCAGAGACTCTAAAAGTGGCAGTTCGAGAACTCTCTCGCTTGATCTCACTAAATATCAGGAGTCCTAA 3384 0.3966 MSLGKIHRLEIENFKSYKGSQIIGPFAGFTAIIGPNGAGKSNLMDAICFVLGVRTIHLRGSQLKDLIYVFDDSGNQKKERSALVRLVYQLADKSEIQFARTITATGASHYFIDGIVVTWDVYNAKLISLDILVKASNFLVIQGEVESIASKNPKELTLLFEQISGSDQFKREYDKLEKEKNSAEEKLALVYQKKKTILMEKKKKKEQKKKAEQHLRLQGELKSMKREHFLWKLFNIENDFAKTTEELEVDKTSCEGVGKEVEKFEHEANEKEKELANCVEEIKLLEEKITEISNKLDDKTRPDVIKLKEEISRINLKIEKAKKELCKKGEERKRHANDIAILQRSIWDLKAKMDDLQEKGRNVGGQIKLDGNDLEEYSRIKEEVMIKTANLREKKELLDGQQRADSEAQTNLEETLQQLKNRESELDSKEKQIYENERDAKFADTVATLKRLFQGVHGRMTDLCRPTQKKYNLAVTIAMGRLMDAIVVDDENTAKECIRHLKELRFPPDIYSSTFDPSLERAILFAVGNTLVCEDLEEAKILSWTGERLKVVTVDGILLTKSGTMTGGTSGGMEARSKKWDAKKFEESSQKKEKYESKLEELGSIRDMHHIKVSEVEEKISELKKKAQYAEIEKQYIENKLPTLSDEKGTIKKQIERVSPELIKLRDAVEKRNAEIRELEKSINEITDEIYKDFSKSVGVANIREFEETQLKASQNAAEERLNLRSQLSKLKYQLEYEQNRDMSSRIQELESSLSALKNDLKGLQNKEAKAKLAVENATEQINQLKGEYKELKSKSEDSEKEIQERKKRASAAKIKLSQLNHQIKSKEEWIEKLMGQKQEIQDKCKLEQISLPIISDPMDTDSSTGPVFDFDELSRTLRNRRHCDRDKIEVEYKQNMDALMSKIESTAPNLKALKQYDALVEKERLITEEFEAVMKEEKEKTGRFNVVKQERYNLFMGAFNNISGNIDKIYKQLTKSNTHLLGGTAYLYLENEDDPFQHGIKYTAMPPTKAFYDMDQLSGGEKTIATLALIFSIHSYKPSPFFILDEVDAALDNLNVAKVASFIRSKSCEGARANQDTDVGKGFQIIQISQKDHFYNNAEVLVGVCRDSKSGSSRTLSLDLTKYQES 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo25g00062 1127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 764 1110 IPR027417 -
Mepo25g00062 1127 SUPERFAMILY Smc hinge domain 417 591 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Mepo25g00062 1127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 1068 IPR027417 -
Mepo25g00062 1127 CDD ABC_SMC1_euk 6 153 IPR028468 GO:0005524|GO:0007062|GO:0008278|GO:0016887
Mepo25g00062 1127 SUPERFAMILY Tropomyosin 581 831 - -
Mepo25g00062 1127 Coils Coil 339 359 - -
Mepo25g00062 1127 Gene3D - 228 383 - -
Mepo25g00062 1127 SMART SMC_hinge_2 454 543 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Mepo25g00062 1127 PIRSF SMC 512 1126 IPR024704 GO:0005524|GO:0016887
Mepo25g00062 1127 PIRSF SMC 4 369 IPR024704 GO:0005524|GO:0016887
Mepo25g00062 1127 PIRSF SMC 366 508 IPR024704 GO:0005524|GO:0016887
Mepo25g00062 1127 Coils Coil 613 640 - -
Mepo25g00062 1127 Coils Coil 304 324 - -
Mepo25g00062 1127 Gene3D - 409 540 - -
Mepo25g00062 1127 Coils Coil 254 295 - -
Mepo25g00062 1127 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER 434 1127 - -
Mepo25g00062 1127 Pfam RecF/RecN/SMC N terminal domain 6 1108 IPR003395 -
Mepo25g00062 1127 Coils Coil 740 823 - -
Mepo25g00062 1127 Coils Coil 166 214 - -
Mepo25g00062 1127 Pfam SMC proteins Flexible Hinge Domain 454 503 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Mepo25g00062 1127 Coils Coil 409 432 - -
Mepo25g00062 1127 Coils Coil 662 689 - -
Mepo25g00062 1127 Gene3D - 707 850 - -
Mepo25g00062 1127 Gene3D - 856 1126 IPR027417 -
Mepo25g00062 1127 Gene3D - 3 227 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo25g00062 4 67 Structural Maintenance of Chromosomes family AT5G61460 40.580 3.52e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo25g00062 K06636 - gmx:100791953 1342.02