Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo25g00014 ATGTCTGAGAGACCAGACAGGCTGAGAGCAAGGAGGGAGACCATGACACATAGTGCAAGGGCCAAAAAGGCGGTTGCGCGTCCTGCTCCTCGAAGGAGACATGGCGTTAGGATCATGAGGAGTGATGATGCACGCCGTCCTAGGAGGAGGGCCAGGCTCAGCAGCAAGATCAGGAAGAGGAGGCTTAGGAGGAGGTTGGACCGCAGGTTTTTCCCGAGGGCCCTACTGACATGTCGCTTCTACCGAATTTCGGTAGACACGTGGCATGTAGGCTATGGAGCGACGTCACGGGTCGGAGAAGTCAACAGCAATGGTGTGCATACCTTTCTCAACGAACTCTCCAATGCTGCCCCTGATACTATGATCAAAGTTAGGGCAAATTGCATTCATGCTACAATACCAAGGAGGTTCTCACCTTCATTGAAGAAAGTCTTGCAAGAAGGCAAGATATATGTTATTTCGTGCTTTGAGGTCTCAAAAAACAAGGAGAAATATGCCGTGGTTGAAAACAATCCATCCATGCTTAGTTTCTATGGTGGCGCAGTTGTAACTAAGGAGGGCTCGGATGACAACACAATCCCTCGCTATATCTTTGAATTTGTTAATTTCAATGATCTGCCCAAACGTTGCGGGAAAGAGGTGTTAGCAGATGTAATTGGATTTATAATTGATGTGGATCCAATTGAGGAGAAAACAAACGTCAATGGAAAAGTCGACATGTTGTCACTTCATTTGGGGGATGGCAGTGGGAATGTCTTGAAGGTAACACTATGGGATGACTATGCTCCAATGTTTAATCAAAAACTGAAAGATCAAATGCATTCTGCTCCTAATCCAAATGTGGCAATTTTTACCTCCACTTTGGTTAAACAATACCAAGGTGAACTTTATATTTCGTCTTCAAGATCCACAACAATTTATATCAACATAGACACCCCTGAAGTTGCTGATCTAATTTTGTCGTCCAAGGGAAAGACCAGTGTTGTGAAAACAACTGAAACTTTGTCTTTAACTACTGTTGATGTGAAGACTATATCTGAGCTTTTATCCATGGCAGTTTCGGGAGTTTATCAGGGTGATGTTGTCTATAATTGTGTTGCAATGGTTGATGACATCTTGCTAAAAAATGGATTGTGTTATGTTTCTTGCCCTCATTGTAGAAAAACTACTGGACGTGACCCTGATCTGCCTAAACAGCTCCAGCATATCATTGGTTCAAAGCATATTTTCCAAGTTAAGCTGAGCTCTTACTTTGAACGTCGTGGAATACAAAGTTTCACAGCACATAAGATTCTGAAGCCAATTGTTAAGGTGATTGAGAAAGAAGACAACATTGGCGTTGCGTGTTCTTCCTCAAATGGATCTCTAAGCATTGAAATACCAGATTTGCAGAAGAAGAGAAGAAGATTAATATTGCACTCCAACAAATCAGGTGATAAGGACCAGAATGAAGATGTGGAAGATTTAGAAGATTGA 1476 0.4262 MSERPDRLRARRETMTHSARAKKAVARPAPRRRHGVRIMRSDDARRPRRRARLSSKIRKRRLRRRLDRRFFPRALLTCRFYRISVDTWHVGYGATSRVGEVNSNGVHTFLNELSNAAPDTMIKVRANCIHATIPRRFSPSLKKVLQEGKIYVISCFEVSKNKEKYAVVENNPSMLSFYGGAVVTKEGSDDNTIPRYIFEFVNFNDLPKRCGKEVLADVIGFIIDVDPIEEKTNVNGKVDMLSLHLGDGSGNVLKVTLWDDYAPMFNQKLKDQMHSAPNPNVAIFTSTLVKQYQGELYISSSRSTTIYINIDTPEVADLILSSKGKTSVVKTTETLSLTTVDVKTISELLSMAVSGVYQGDVVYNCVAMVDDILLKNGLCYVSCPHCRKTTGRDPDLPKQLQHIIGSKHIFQVKLSSYFERRGIQSFTAHKILKPIVKVIEKEDNIGVACSSSNGSLSIEIPDLQKKRRRLILHSNKSGDKDQNEDVEDLED 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo25g00014 491 Gene3D - 119 185 IPR012340 -
Mepo25g00014 491 MobiDBLite consensus disorder prediction 1 20 - -
Mepo25g00014 491 MobiDBLite consensus disorder prediction 1 54 - -
Mepo25g00014 491 MobiDBLite consensus disorder prediction 35 49 - -
Mepo25g00014 491 SUPERFAMILY Nucleic acid-binding proteins 198 318 IPR012340 -
Mepo25g00014 491 CDD RPA1_DBD_B_like 217 323 - -
Mepo25g00014 491 Gene3D - 192 332 IPR012340 -
Mepo25g00014 491 Pfam Replication protein A OB domain 212 309 IPR031657 -
Mepo25g00014 491 PANTHER OS03G0429900 PROTEIN 244 392 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mepo25g00014 491 CDD RPA1_DBD_A_like 127 183 - -
Mepo25g00014 491 MobiDBLite consensus disorder prediction 472 491 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo25g00014 123 384 Core DNA Replication Machinery Family AT2G06510 23.704 1.70e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo25g00014 - - mtr:120580096 522.702