LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo242g00001	ATGCATTCGTCGAAATTCGTTGGCAAAGGAGTCGTGCTATATAGCGCTACTCATAATATACATACCCACTACTTGCCTTTGGATTATTTTATTTTTTATAACTTCCTGCCTCATTTTTTGTTTATCACTTGGATTTGGGATTGCACAGATGGCAACAAATACAAAGGGGGCATATATATGGTCTTCGAATATATGGATCATGATTTAACAGGTCTTGCGGACCGGCCTGGCATGAGATTTACTGTCCCCCAGATTAAGTGTTACATGAGGCAGCTTTTGACGGGACTTCACTATTGTCATGTCAATCAAGTGCTTCATCGTGATATCAAAGGCTCAAATCTTCTCATAGATAACGAAGGTAATCTGAAGCTGGCAGATTTTGGATTGGCAAGGTCATTTTCAAATGAGCATAATGCCAACCTTACAAATCGAGTCATCACTTTATGGTACAGACCCCCTGAGTTACTATTGGGGACAACAAGGTACGGGCCAGCTGTTGATATGTGGTCTGTTGGGTGCATTTTCGCTGAGCTTTTGCACGGGAAGCCCATCTTTCCTGGAAAAGATGAGCCAGAGCAATTGAACAAGATTTTTGAGTTGTGTGGAGCACCGGATGAGGTGAACTGGCCTGGAGTTACTAAGACTCCTTGGTACAATCAGTTTAAGCCATCAAGACCGATGAAAAGGCGTCTGAGGGAAGTTTTTAGACATTTTGATCGCCATGCATTGGAATTGTTGGAGAAGATGCTCACACTTGATCCAGCTCAGAGAATTCCTGCCAAAGACGCACTTGATGCTGAGTACTTCTGGACTGATCCATTACCATGTGATCCCAAGAGTTTACCCAAGTACGAGTCATCACATGAGTTTCAGACCAAGAAAAAGCGTCAGCAACAACGGCAAAATGAAGAAAATGCCAAGCGTCTTAAAATGCAGCATCCACAGCAGCATACCCGTCTTCCTCCGATTCAGCAGGGTGGACATGCCCAAATGCGGCAAGGTCCTAACCACCTTATTCATGGCTCTCAACCAGCAGGTGCTGCAGGACCTAGCCATCATTATGGGAAGCCTCGAGGTCCCTCTGGTGGTCCAGGAAGGTATCCTCCGGGTGGGAACCCTAGTGGGGGATACAATCATCCAAATCGTGGAGGTCAAGGAGGGGGTGCTGGTTATGGCAGTGGACCATATCCTCCTCAAGGGCGGGGGGCACCTTACGGGTCTAGTGGTATGCCTGCAGGAACTGGTGGTGGTCCTCGCGGTGGAGGTGGCTTTGGAGCTCCAAATTATCCTCAAGGTGGTCCTCCATATGGTGGATCGGCTGCTGGTCGTGGGAATCGCAACCAACAGTATGGTTGGCAGCAGTAG	1365	0.4733	MHSSKFVGKGVVLYSATHNIHTHYLPLDYFIFYNFLPHFLFITWIWDCTDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNEHNANLTNRVITLWYRPPELLLGTTRYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVTKTPWYNQFKPSRPMKRRLREVFRHFDRHALELLEKMLTLDPAQRIPAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEENAKRLKMQHPQQHTRLPPIQQGGHAQMRQGPNHLIHGSQPAGAAGPSHHYGKPRGPSGGPGRYPPGGNPSGGYNHPNRGGQGGGAGYGSGPYPPQGRGAPYGSSGMPAGTGGGPRGGGGFGAPNYPQGGPPYGGSAAGRGNRNQQYGWQQ	454

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo242g00001	454	Pfam	Protein kinase domain	55	269	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo242g00001	454	Gene3D	Transferase(Phosphotransferase) domain 1	67	309	-	-
	Mepo242g00001	454	SUPERFAMILY	Protein kinase-like (PK-like)	48	277	IPR011009	-
	Mepo242g00001	454	FunFam	Cyclin-dependent kinase C-2	67	309	-	-
	Mepo242g00001	454	PANTHER	CELL DIVISION PROTEIN KINASE	57	275	-	-
	Mepo242g00001	454	CDD	STKc_CDK9_like	53	269	-	-
	Mepo242g00001	454	ProSiteProfiles	Protein kinase domain profile.	1	269	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo242g00001	454	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	104	116	IPR008271	GO:0004672\|GO:0006468
	Mepo242g00001	454	SMART	serkin_6	1	269	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo242g00001	454	MobiDBLite	consensus disorder prediction	282	311	-	-
	Mepo242g00001	454	MobiDBLite	consensus disorder prediction	280	454	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo242g00001	50	454	Core Cell Cycle Gene Families	AT5G10270	75.061	0.0	593

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_CDK-CRK7-CDK9	Mepo242g00001		Pkinase	1.6e-51	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo242g00001	K08819		-	gmx:100793565	683.33