Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo23g00046 ATGTTAGATTCGCTTCGTCGAAAAGACGAAGAAGAAGACAAAAACAAAGATTTGCCGCCGGCATTGCCATCTCGCCCGGCGTCCAAGGCACGGCTGCCTCCCGCCAGGCGGTCGTTGCCGAATAATTTCAAAGTCGGGAGTGGATTGAATGACAATGTGGAAAGCAAAAGAAAGGAAATATCAATATCAACATCAACAACAAGAAGAAGAGAGAGTATGAATAGTTTTGGGAGGAAGAGAGTGAAGAAAGATGCTGCTGTGGAGTCACCTTATGCGAAATTCGATTGTGACACTCTTTCTTATTTCATCAAAATGAAGCTTCGTGTTTGGTGTAGGCAACCAAGAGGGCAATGGGAGCTAGGGTCAATACAATCAACGTCAGGAGAAGAAGCATCTGTTTTAGTTTCAAGTGGAAAAGTGCTGAAAGTTGCTAGATCAGAACTCGTACCAGCTAATCCTGACATTTTAGAGGTTTCAGATGACCTTGTTAAACTGGCTTATTTGAATGAGCCATCGGTTCTTCATAATCTTAGGTTTAGATATTCTCGGGAGATGATTTATAGTAAAGCAGGGCCGGTTTTAATTGCACTCAATCCTTTCAAAGATCTCCAGATGTATGGAAATGATTATGTTTCCACTTATAGGCAGCGACTTGTTGATAGTCCTCATGTTTATGGTATTGTAGAAGCAGCTTATAATCAGATGATGAGAGATGAAGTAAATCAGTCCATTATTATAAGCGGTGAGAGTGGATCTGGTAAGACAGAGACAGCTAAAATTGCTATGCAATACTTAGCTACTCTTGGCAGCGGCAGTTGTGGGAGAGCAAATGATGTTCTTCAGACAAATTGTATACTGGAAGCTTTTGGGAATGCAAAAACATCTGTGAATGACAACTCTAGCAGATTTTCAAGAGTTGTTCAATTGGTCAGTGGTGAGAGGTCGTATCACGTATTTTATCAACTTTGTGCTGGATCTTCATCTAGTCTTAAAGAGAGACTAAATCTTAGAGCAGCCTGTGAATATAAATATCTAAATCAAAGTGACTGCATGACAATTGGTGGTATTGATGATGCTAAAAACTTTCATCAGTTGATGAAAGCATTTGATGCTGTTCGAATTTGTAAAGAGGACCAAGAGATGATCTTTAAGATGCTTGCTACAATACTATGGCTGGGAAATATATCATTCAAAGTTACTGACAGTGAAAATCACATCGAGGTTGTGGGTGATGAAGCTGTAACCAGTGCTGCCCTGCTGATGGATTGCAGTTCCCAGGATTTAATGTCAGCATTATCTAGCCAGAAAATCCAATCTGACCAGGATATTGTTTCCAAAAGTTTGACATTATTTCAGGCAATTGAAACAAGAGATGCAATCGCCAAATTTATTTATTCAAGCTTGTTTGAATGGCTTGTACAACAAGTTAACAAGTCGCTTGAAGTGGATGAAAACCATACTGAGAAATCCATTAGTATCCTTGATATTTGCGGGTTTCAGTCATTCCAGAAGAACAGTTTTGAACAGTTGTGTATAAATTATGCCAATGAGAGGCTTCAACAACATTATAATCGGCATCTGTTTAAACTTGAGCAGGAGGACTGTGAATCAGACGGCATAGATTGTACAGTGTTAGATTTTGAGGACAACCAAGAGTGCTTGGATCTATTTGAGAAGAAACCTCTCAGTCTACTCTCTTTGTTGGATGAGGATTCAAATTTTCCTGAGGCATCTGATTTAACATTTGCCAACAAACTTAAGAATCTCCTCGATGCTAATCATTGCTTCAAAGAGGAAAGCAGCAGAGCTTTCAGTGTTCGTCACTATGCAGGGGAGGTTTTGTATGATACAAATGGCTTTCTAGAAAAGAACAGAGATACATTGTGTTCTAATTCCATTCAACTCCTTTCGTCAAGTAATTGTGAACTGCTGAAGTTATTCTCCGAAGTGTTTAACCAGTCTGAGGAGCATGGAAATTCCACTTTCCACGTTGGTGCACCGTACTCACAGAAGATAGGTGTTGGAACAAAGTTCAAGGATCAATTGTTCAAGTTGATGCATCAGTTGGAGAGCACGACTCCTCACTTTATTTGCTGCATAAAGCCAAATGCTAAGAAGCTTCCTGGAATTTATGACAACGAACTTGTCCTTCCACAGCTCAGATGCTGTGGACTTCTAGAAGCTGTTAGAATTTCAAGGGCTGGGTATCCTACTCGAATTAACCATCAGGATTTTTCCAGAAGGTACGGGAATCTGCTTTCTGAGACTGATGTACCTCAGGATCCGTTGAGCACCACAGTCAAGGTTTTGCAAAAATTTAATATCCCTTCTGAAATGTACCAAGTTGGCTACACAAAACTGTATCTTCGAGCAGGGCAGATTGGTGCACTGGAGGATAAGAGAAAACAGTTTTTGCAAGCAACAGTTGGGATTCAAAAATGCTTCCGTGGTCATCAAGTCCGGAGTTATTTCTGTGAACTTAAGAATGGAGTGACAACATTACAATCATTTATTCGTGGAGAAGTTACAAGAAGGAAACATGGTGTTTTGACGAAATCTTCCATAACAGTTTATTCTAAAAAACTTGAGGAGATTCATGCAATCATATTACTTCAATCTGTGATTCGTGGGTGGAAGGTTCGTAGGGATTCTAGTAACATCAATAAATTGAGGAAATATCATGAAAATGCACAACCTAAACGGAAGTCTCGTGTTAAGATGCCAGAAGTTAAGCAGGATTTTTCCAACGAGCTGGTTCAAAATAGGCCTTCAGCTTTATCAGAACTCCAAAAACGGGTGTTCAGGGCTGAAGCAATTATTGAGAAAAAGGAAGACGAAAATACCGAATTGAGGGAAAAGTTAAAACAATCTGAAAGAAAAAGGGTTGAATATGAGGCTAAGATGAAGTCAATGGAGGATGCATGGCAAAAGCAGATGGCATCCTTGCAAACGAGTCTTGCTGCTGCTAGAAAGAGCCTTGCTTCAGAGAATGGCACTGTTCAACCTGTAAGACATGATCTTGTGTCACCTCGCTACTATGATTCTGAAGATGCTACTTCATTGGGATCTCAAACCACTAATGGGAGCACACATATGAAGCTTTCTGGTAGTTTTTCGGTGTCTGATGCAGGGAGGCAGGCTAGTGGTACTTTGACTACAGTGAGCAATCTGATGAAGGAATTTGAGCAGCGAAGACAAACCTTTAATGATGAAGTTAAAGCTTTGAATGAGGTTAAACCAGGGCAGTCTGGCAACACAAATTCTGCTGATGAACTTCGGAAACTTAAGCAAAGATTTGAGGGATGGAAGAAACAATACAAAGTCAGATTACGAGAAACAAAAGCAAGGATTTCAGAAAATGAAAAAAGCCGACGGACATGGTGGGGCGGGAAATTAAGCTCAAGAGCATAA 3411 0.4019 MLDSLRRKDEEEDKNKDLPPALPSRPASKARLPPARRSLPNNFKVGSGLNDNVESKRKEISISTSTTRRRESMNSFGRKRVKKDAAVESPYAKFDCDTLSYFIKMKLRVWCRQPRGQWELGSIQSTSGEEASVLVSSGKVLKVARSELVPANPDILEVSDDLVKLAYLNEPSVLHNLRFRYSREMIYSKAGPVLIALNPFKDLQMYGNDYVSTYRQRLVDSPHVYGIVEAAYNQMMRDEVNQSIIISGESGSGKTETAKIAMQYLATLGSGSCGRANDVLQTNCILEAFGNAKTSVNDNSSRFSRVVQLVSGERSYHVFYQLCAGSSSSLKERLNLRAACEYKYLNQSDCMTIGGIDDAKNFHQLMKAFDAVRICKEDQEMIFKMLATILWLGNISFKVTDSENHIEVVGDEAVTSAALLMDCSSQDLMSALSSQKIQSDQDIVSKSLTLFQAIETRDAIAKFIYSSLFEWLVQQVNKSLEVDENHTEKSISILDICGFQSFQKNSFEQLCINYANERLQQHYNRHLFKLEQEDCESDGIDCTVLDFEDNQECLDLFEKKPLSLLSLLDEDSNFPEASDLTFANKLKNLLDANHCFKEESSRAFSVRHYAGEVLYDTNGFLEKNRDTLCSNSIQLLSSSNCELLKLFSEVFNQSEEHGNSTFHVGAPYSQKIGVGTKFKDQLFKLMHQLESTTPHFICCIKPNAKKLPGIYDNELVLPQLRCCGLLEAVRISRAGYPTRINHQDFSRRYGNLLSETDVPQDPLSTTVKVLQKFNIPSEMYQVGYTKLYLRAGQIGALEDKRKQFLQATVGIQKCFRGHQVRSYFCELKNGVTTLQSFIRGEVTRRKHGVLTKSSITVYSKKLEEIHAIILLQSVIRGWKVRRDSSNINKLRKYHENAQPKRKSRVKMPEVKQDFSNELVQNRPSALSELQKRVFRAEAIIEKKEDENTELREKLKQSERKRVEYEAKMKSMEDAWQKQMASLQTSLAAARKSLASENGTVQPVRHDLVSPRYYDSEDATSLGSQTTNGSTHMKLSGSFSVSDAGRQASGTLTTVSNLMKEFEQRRQTFNDEVKALNEVKPGQSGNTNSADELRKLKQRFEGWKKQYKVRLRETKARISENEKSRRTWWGGKLSSRA 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo23g00046 1136 ProSiteProfiles IQ motif profile. 864 892 IPR000048 GO:0005515
Mepo23g00046 1136 ProSiteProfiles IQ motif profile. 806 833 IPR000048 GO:0005515
Mepo23g00046 1136 ProSiteProfiles IQ motif profile. 827 856 IPR000048 GO:0005515
Mepo23g00046 1136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 850 IPR027417 -
Mepo23g00046 1136 MobiDBLite consensus disorder prediction 1 19 - -
Mepo23g00046 1136 Gene3D - 804 854 - -
Mepo23g00046 1136 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 104 153 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mepo23g00046 1136 MobiDBLite consensus disorder prediction 51 65 - -
Mepo23g00046 1136 Gene3D Kinesin motor domain 122 307 IPR036961 -
Mepo23g00046 1136 Pfam Myosin head (motor domain) 304 790 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo23g00046 1136 Gene3D - 314 373 - -
Mepo23g00046 1136 SMART iq_5 826 848 IPR000048 GO:0005515
Mepo23g00046 1136 SMART iq_5 863 885 IPR000048 GO:0005515
Mepo23g00046 1136 SMART iq_5 803 825 IPR000048 GO:0005515
Mepo23g00046 1136 PANTHER MYOSIN 150 1120 - -
Mepo23g00046 1136 Gene3D Myosin VI head, motor domain, U50 subdomain 375 670 - -
Mepo23g00046 1136 Coils Coil 1058 1078 - -
Mepo23g00046 1136 Gene3D - 500 692 - -
Mepo23g00046 1136 SMART MYSc_2a 151 803 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo23g00046 1136 CDD MYSc_Myo8 171 790 IPR036022 -
Mepo23g00046 1136 PRINTS Myosin heavy chain signature 187 206 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo23g00046 1136 PRINTS Myosin heavy chain signature 490 518 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo23g00046 1136 PRINTS Myosin heavy chain signature 284 311 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo23g00046 1136 PRINTS Myosin heavy chain signature 241 266 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo23g00046 1136 PRINTS Myosin heavy chain signature 543 571 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo23g00046 1136 Gene3D - 735 803 - -
Mepo23g00046 1136 Pfam IQ calmodulin-binding motif 866 882 IPR000048 GO:0005515
Mepo23g00046 1136 Pfam IQ calmodulin-binding motif 831 847 IPR000048 GO:0005515
Mepo23g00046 1136 Pfam IQ calmodulin-binding motif 806 824 IPR000048 GO:0005515
Mepo23g00046 1136 MobiDBLite consensus disorder prediction 1 80 - -
Mepo23g00046 1136 Coils Coil 926 974 - -
Mepo23g00046 1136 Gene3D Kinesin motor domain 308 731 IPR036961 -
Mepo23g00046 1136 ProSiteProfiles Myosin motor domain profile. 157 802 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo23g00046 1136 FunFam Myosin heavy chain 314 370 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo23g00046 1 1129 Myosins gene family AT5G54280 54.222 0.0 1275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo23g00046 K10357 - gmx:100802074 1555.04