Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo23g00044 ATGGCCACCACAACAACAGAACAAGACACCTCAAGTGCTTTACACATGCACGACACCGCAAACGACGACGCAACTGAGGACAGTGAGCCGGAGAACTACCTAGATGACGACGACGATGACGAGGAAGAAGAGCAGCAACCAGTGAATTATAGAAGGTCAATATCTTCAACAAGTATCAGTCGAGCTGTGGACCCAAAAGCAAAGTGGGTGCAAGAATGGAATAGAGTCTTCTTGCTAGTATGTGCAGCAGGGTTGTTTGTGGATCCACTTTTCTTCTATGCTCTTTCCATCAGTGATTCATGTATGTGTCTTTTCATCGACGGGTGGTTCGCAGTCACTGTAACGGTGCTCCGTTGCATGACTGATGCTTTGCACTTTTGGAATATCTTCCTCCGCTTCAAGACGGCGAAACGCAGCTCACTTACATTCGCCAGCCATTCGGCCACCGCGGATGGCCGCCGCTTGGTCGCTCTTGCTTATCTTAAGTCCCGCCGTGGCTTCTTCTTTGACCTCTTTGTTATTCTTCCTATACCTCAGATTGTGCTTTGGGTGGCTATTCCTTCTATGTTGGAGCAAGGTTCAGTTACATTGGTGATGACAATATTGTTAATTGTATTTCTCTTCCAATACCTTCCCAAAATTTATCACTCTGTATGCCATTTGCGACGGACACAAAACCTATCTGGCTACATTTTTGGAACTGTTTGGTGGGGTATTGCCCTTAACATGATTGCGTATTTTGTTGCTTCCCATGCTGCAGGGGCATGTTGGTACTTGTTGGGGATCCAAAGAGCATCCAAATGTCTCAAAGAGCAATGTTATAAAACAAATGGTTGTGGCATTAATCTCCTTTCTTGTCATAAGCCAATGTATTATGGAAGTACAAGTTTGTTGAATAAAGATATGGCCAGAATGGCATGGGCAGGGAATAGGGAAGCAAGGTCTACATGCTTAAATAGTCCTGATAACTTCAATTATGGAGCTTATAAATGGACTGTTCAACTTTTCACTAATGAGAACCGACTAGAAAAAGTACTTTTCCCAATCTTCTGGGGCTTAATGACTCTCAGCACTTTTGGAAACCTAGAGAGCACAACGGATTGGCTAGAAGTAGTTTTCAACATCATAATCTTGACTAGTGGACTTCTTCTAGTCACTATGTTGATTGGAAACATCAAGGTATTTTTGCATGCAACAACATCGAAGAAGCAAGTGATGCAATTGAGGATAAGAAATGTTGAATGGTGGATGAGGAAAAAGCATTTGCCGCAGGGGTTTCGACAACGTGTGCGTAACTATGAAAGACAACGTTGGGCTGCTATGCGTGGGGTTGATGAATGTGAAATGACAAAAAATCTTCCTGAAGGTTTAAGAAGAGACATTAAATACCATCTTTGTTTGGATTTGGTGAGACAGGTGCCATTGTTTCAACATATGGACGAGCTGGTTCTAGAGAACATATGTGACCGAGTGAAATCTCTGATATTCACCAAGGGAGAAACGATAGCGAGAGAAGGAGACCCAGTTCAAAGAATGTTATTTGTAGTGAGGGGTCATCTTCAAAGCAGCCAAGTATTAAGAGACGGGTTGAAAAGTTGCTGCATGTTAGGACCAGGAAACTTCAGTGGAGATGAGCTTCTTTCATGGTGTTTGAGGAGACCTTTCATAGAGCGTCTTCCACTATCAACATCAACACTTGTCACACTTGAAACAACTGAGGCTTTTGGTCTTGAAGCAGAGGATGTCAAGTATGTGACACAACATTTCAGGTACACGTTTGTGAAGGAAAAGGTGAAGAGAAGTGCTAGGTATTACTCACCAGGGTGGAGAACTTGGGGTGCTGTGGCCATACAATTGGCATGGAGAAGGTACAGACATAGGTTAACTTTGAACTCATTGTCGTTTATAAGACCTAGAAGGCCCTTGTCAAGATGTTCTTCATTGGGAGAAGATAGACTTCGACTCTACACAGCTTTGTTAACTTCACCAAAGCCTAATCAAGATGATTTTGACTTTTGA 2019 0.4299 MATTTTEQDTSSALHMHDTANDDATEDSEPENYLDDDDDDEEEEQQPVNYRRSISSTSISRAVDPKAKWVQEWNRVFLLVCAAGLFVDPLFFYALSISDSCMCLFIDGWFAVTVTVLRCMTDALHFWNIFLRFKTAKRSSLTFASHSATADGRRLVALAYLKSRRGFFFDLFVILPIPQIVLWVAIPSMLEQGSVTLVMTILLIVFLFQYLPKIYHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRASKCLKEQCYKTNGCGINLLSCHKPMYYGSTSLLNKDMARMAWAGNREARSTCLNSPDNFNYGAYKWTVQLFTNENRLEKVLFPIFWGLMTLSTFGNLESTTDWLEVVFNIIILTSGLLLVTMLIGNIKVFLHATTSKKQVMQLRIRNVEWWMRKKHLPQGFRQRVRNYERQRWAAMRGVDECEMTKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDELVLENICDRVKSLIFTKGETIAREGDPVQRMLFVVRGHLQSSQVLRDGLKSCCMLGPGNFSGDELLSWCLRRPFIERLPLSTSTLVTLETTEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWGAVAIQLAWRRYRHRLTLNSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNQDDFDF 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo23g00044 672 FunFam Cyclic nucleotide-gated ion channel 1 402 466 - -
Mepo23g00044 672 Pfam Cyclic nucleotide-binding domain 496 583 IPR000595 -
Mepo23g00044 672 CDD CAP_ED 475 581 IPR000595 -
Mepo23g00044 672 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 52 632 - -
Mepo23g00044 672 ProSiteProfiles cAMP/cGMP binding motif profile. 475 554 IPR000595 -
Mepo23g00044 672 SUPERFAMILY Voltage-gated potassium channels 68 396 - -
Mepo23g00044 672 Gene3D Jelly Rolls 473 591 IPR014710 -
Mepo23g00044 672 MobiDBLite consensus disorder prediction 24 44 - -
Mepo23g00044 672 MobiDBLite consensus disorder prediction 1 53 - -
Mepo23g00044 672 Gene3D Helix hairpin bin 400 466 - -
Mepo23g00044 672 FunFam cyclic nucleotide-gated ion channel 4 473 591 - -
Mepo23g00044 672 SUPERFAMILY cAMP-binding domain-like 401 589 IPR018490 -
Mepo23g00044 672 Pfam Ion transport protein 73 392 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mepo23g00044 672 MobiDBLite consensus disorder prediction 1 18 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo23g00044 51 671 Ion Channels AT5G54250 76.266 0.0 1003
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo23g00044 K05391 - gmx:100783341 1109.75