Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo23g00012 ATGAGTTCTGTTTTGTTGTTTGACGCTAACCAGTTTGGATTGAAAAAGAATGACAAGGAATATTACACTCTTCCGACTGATAGCAATTCTCGTTTGATATTGGAAGCTGATGGGGATCTTAAATACCAAACCTGGTCAGAGGAATCTAAGAGTTGGGTTGTTCTACAGTCATCCAAGTGTGCCACAGACAATTCATGTGGAAAATTTTCCATTTGTAATCTGCAAGCTCTTGAGCCTTGTCAATGTCTCAATGGTTTTGAACCGTCTGATGCTGATTCTTGGGCGCAGGGAGACATGTCAGAGGGATGTATCAGGAAAGAGGAGTTGTCCTGTGGTAAAGATAGATTCTTGTACATGTTAGTGGAATCACCTCTACCGCATATGAACCTGCAGGTGGATATGGCGGCAGCGGCACAATGTAATTATGCTTGCTTCACTAATTGTTCCTGTGTTGCTTATGCTTATGATATATTAGTCAGTACCTGCATGTTGTGGAATGATCGAGTACCGACTCTCAAGAACACCTCCATTGATATTAATGGTAATAATATTAAAACAAATTTTTATCTCAGGCTTGCTGGCTCAGACAGACTTATCACAAATTCTAATCCAATTGGAAGACATGGAAACAGGAAGAGGAATCTACTTGTAATTGTTATTTTGATCTCATTTCTACTATTTCTTTTGCTGCTTTGCCTATTTGCTTACCGGACTAGAAAGCAAATGAGAAATGGCGATGATTTGCTCAATTTTCAAGTAGGCATGAGCATGAAAGTTAATAAAGACTTGGACATTGCAGACAAGAGTATTAAAGTAAGGAGGAAAGAAGTCAAGTTGCCATTATTCAGTTTTGCAAGCGTTTCCGCAGCAACTAATAACTTTTCAGATACAAACAAGCTTGGTGAAGGTGGCTTTGGACCTGTTTATAAGGGCATATTATTGAATGGGGATGAGGTTGCTGTAAAAAGGCTATCCCGAAGATCGGGTCAAGGATGGGAGGAGTTAAGAAATGAAGCATTGTTGATTGCAAAACTCCAACATAATAATCTTGTTAGACTTCTCGGCTGTTGCATTGAGCGAGATGAAAAAATGCTTATTTATGAATTCATGCCCAATAAAAGCTTGGATTGTTTTCTCTTCGATGCTGTAAAAAGAAGGATGCTAGATTGGGGAACACGGGTTCGAATAATTGAAGGAATTGCCCAAGGACTGCTTTATCTTCATCAATATTCAAGGTTCCGGATCATTCATCGAGATTTAAAAGCTAGCAACATATTGTTAGACACCAACATGAATCCTAAAATATCAGATTTTGGAATGGCTAGGATATTTGGTGAGAATGAGCTTCAAGCAAATACAAATCGGATTGTTGGAACTTATGGCTACATGTCCCCTGAATATGCAATGGAAGGCCTTTTCTCAGTTAAATCCGACGTCTTTAGCTTTGGAGTCCTTTTGTTAGAGATTATAAGTGGCAAGAAGAATACTGGTTTTTATCAAACAAGCTCTTTCAATCTTCTTGGATATGCTTGGGATCTTTGGAACAACGATTCTGGAATGGAGCTAATTGACTCAGAATTGGATGATATCTCCAACAAACATTTAGTACCAAGATACGTGAATATCGGACTTCTCTGTGTTCAACAAAGTCCAGATGATAGGCCAACCATGTCTGATGTTGTATCAATGATTGGTAATGACACTGCATCCCTTTCAAGTCCAAAGCCACCAGCATTTCAAAATGTGAGAGGTATTGAATATACAAGACAACCTAAAAGCATAGTGGAAAACTTTTCTGTGAATGGCATCACAGATTCACTCATTGAAGCAAGATGA 1836 0.3873 MSSVLLFDANQFGLKKNDKEYYTLPTDSNSRLILEADGDLKYQTWSEESKSWVVLQSSKCATDNSCGKFSICNLQALEPCQCLNGFEPSDADSWAQGDMSEGCIRKEELSCGKDRFLYMLVESPLPHMNLQVDMAAAAQCNYACFTNCSCVAYAYDILVSTCMLWNDRVPTLKNTSIDINGNNIKTNFYLRLAGSDRLITNSNPIGRHGNRKRNLLVIVILISFLLFLLLLCLFAYRTRKQMRNGDDLLNFQVGMSMKVNKDLDIADKSIKVRRKEVKLPLFSFASVSAATNNFSDTNKLGEGGFGPVYKGILLNGDEVAVKRLSRRSGQGWEELRNEALLIAKLQHNNLVRLLGCCIERDEKMLIYEFMPNKSLDCFLFDAVKRRMLDWGTRVRIIEGIAQGLLYLHQYSRFRIIHRDLKASNILLDTNMNPKISDFGMARIFGENELQANTNRIVGTYGYMSPEYAMEGLFSVKSDVFSFGVLLLEIISGKKNTGFYQTSSFNLLGYAWDLWNNDSGMELIDSELDDISNKHLVPRYVNIGLLCVQQSPDDRPTMSDVVSMIGNDTASLSSPKPPAFQNVRGIEYTRQPKSIVENFSVNGITDSLIEAR 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo23g00012 611 Gene3D Phosphorylase Kinase; domain 1 268 369 - -
Mepo23g00012 611 Pfam PAN-like domain 111 167 IPR003609 -
Mepo23g00012 611 SUPERFAMILY Protein kinase-like (PK-like) 279 580 IPR011009 -
Mepo23g00012 611 Gene3D Transferase(Phosphotransferase) domain 1 370 574 - -
Mepo23g00012 611 Pfam S-locus glycoprotein domain 15 89 IPR000858 GO:0048544
Mepo23g00012 611 SMART serkin_6 294 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo23g00012 611 ProSiteProfiles Protein kinase domain profile. 294 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo23g00012 611 Pfam Protein tyrosine and serine/threonine kinase 297 563 IPR001245 GO:0004672|GO:0006468
Mepo23g00012 611 FunFam Uncharacterized protein 269 369 - -
Mepo23g00012 611 ProSiteProfiles PAN/Apple domain profile. 111 193 IPR003609 -
Mepo23g00012 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Mepo23g00012 611 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 370 572 - -
Mepo23g00012 611 CDD STKc_IRAK 300 564 - -
Mepo23g00012 611 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 56 580 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo23g00012 217 579 Receptor kinase-like Gene Family AT4G23190 52.861 6.07e-126 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo23g00012 PK_Tyr_Ser-Thr 5.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo23g00012 - - mtr:11407439 882.863