Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo23g00006 ATGCCCTTAGGCACGGCCATACATAACATAGAAATAACACTTGGAAAGGGTGGACAATTAGCTAGAGCAGCTGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCAACATTAAAATTACCTTCTGGAGAGGTTCGTTTGATATCAAAAAACTGCTCAGCAACAGTAGGACAAGTAGGGAATGTTGGAGTAAACCAAAAAAGTTTGGGCAGAGCCGGAGCTAAACGTTGGTTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCACCCACATGGTGGTGGTGAAGGGAGGGCCCCGATTGGTAGAAAAAAACCCTCAACTCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAAGAATAAATATAGTGATAATTTGATTCTTCGTCACCGTAGTAAATAG 429 0.4336 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGAKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPSTPWGYPALGRRSRKKNKYSDNLILRHRSK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo23g00006 142 NCBIfam 50S ribosomal protein L2 1 141 IPR005880 GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740
Mepo23g00006 142 SUPERFAMILY Translation proteins SH3-like domain 1 138 IPR008991 -
Mepo23g00006 142 ProSitePatterns Ribosomal protein L2 signature. 84 95 IPR022671 GO:0003735|GO:0005840|GO:0006412
Mepo23g00006 142 FunFam 50S ribosomal protein L2 1 61 - -
Mepo23g00006 142 Pfam Ribosomal Proteins L2, C-terminal domain 1 117 IPR022669 GO:0003735|GO:0005840|GO:0006412
Mepo23g00006 142 PANTHER RIBOSOMAL PROTEIN L2 1 140 IPR002171 GO:0003735|GO:0005840|GO:0006412
Mepo23g00006 142 MobiDBLite consensus disorder prediction 126 142 - -
Mepo23g00006 142 FunFam 50S ribosomal protein L2 62 142 - -
Mepo23g00006 142 Gene3D - 1 62 IPR014722 -
Mepo23g00006 142 MobiDBLite consensus disorder prediction 90 142 - -
Mepo23g00006 142 Gene3D Ribosomal protein L2, domain 3 63 141 IPR014726 -
Mepo23g00006 142 SMART Ribosomal_L2_C_2 1 119 IPR022669 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo23g00006 1 101 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 46.296 1.77e-20 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo23g00006 K02886 - sly:3950470 274.248