Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo20g00009 ATGGCACCACCATCTTTGTCTACCTTCCCATGTAACTGTACCTATGATGTTTTCCTCAGTTTTAGAGGCAAGGATACGAGAAACAGCATCACCGGTCATCTCTACAATTCTCTCAATCAAAGAGGTATACAGACTTTCATCGATGATCAAGAAATACAAAAAGGAGAAGAAATTACACCTACTCTTCTTCAAGCCATCAAACAATCCAAAATTTTCATTGTTGTTTTTTCCACTAACTATGCATCTTCAACTTTCTGTTTGACTGAACTTGTTACTATTCTTGAGTGTTCCAAATCACAAGGACGGTTCTTTTTGCCGGTTTTTTATGATGTGGATCCATCTCATATTCGAAACCTAACTGGAACTTATGCCGAAGCTTTTGCACACCATGAGGTGAGGTTTAGAGATGAGAAGGATAAGGTGCAGAAATGGAGGGACGCTTTGCGGCAAGCTGCTAGTGTCTCTGGATGGCATTTCCAATCAGGGTCTGAACCAGAATATAAATTTATTGGGAAGATAGTTGCAAATGTGTCTATAAAGATCAACTGTGTTCCTTTGCATGTTGCACACAACCCAGTTGGGTTGGAGTCTCGGATCATAAAAGTGGCATCTCTCCTTGAATTTGAGTCTGATGAGAGAGTCAACATGGTTGGCATTTATGGAATCGGCGGAATAGGCAAATCAACAACTGCTCGTGCTGTGCATAATTTGTTTGCTGATAAATTTGAAGGTGTGTGTTTTCTTGGTGACATAAGAGAGAGGGCTGCAAATCATGATCTGGCACAGCTCCAAGAAACACTACTTTCTGAAATACTTGGGGAAAAGGATATTAAAGTGGGAGATGTTAACAAAGGAATGTCAATAATTAAACAGAGGCTTCAAAGTAAGAAAGTCCTTTTGATTCTTGATAATGTTGACAAAGTGCAGCAGTTACATGCACTTGTAGGAGCGCATGATTGGTTTGGCTTCGGAAGCAAGATCATAATCACTACAAGAGACAAGCATTTGTTGGCCACTCATGGGATTGTGAAAGTATATGAGGTTAAACAGCTAAAAAATGAAAAGGCTTTTGAATTATTTAGTTGGCATGCATTTAAAAATAAAAAAATTGATCCAAGTTATGTGGATATTGCAAAACGTGCAGTATCTTGTTGTCATGGTCTCCCCTTGGCTTTGGAGGTTATTGGTTCTCAATTGTTTGGAAAAAGTTTAGCTGTATGTAGATCCTCATTAGATAAATATGAAAGAGTCCTTCACAAAGACATCCATGCAATTCTGAAAATTAGCTATGATGATTTGGAAGAAAACGAGAAGGGTATTTTTTTAGACATAGCTTGTTTCTTTAATTTTCATGAAATAGACTATGTCAAGGAAATACTATGCTATCGTGGTTTCCACGCGAATAATGGCATAGAACAGCTAACTGACAAATCTCTCATGAAAATTACCAATGGTTGTGTAAGAATGCATGACTTGATTCAAGACATGGGCAGAGAAATCGTGAGGCAGGAATCAGCGTTGGATCCTGGGAGACGTAGTAGATTATGGTTTAGTGATGACATTGTTCATGTTTTGGAAGAAAATAAGGGAACTGATAGAATTGAAGTCATAATCGCCAACCCGCACGAACGCAGAAAAGTTAAATGGTGTGGAAAAGCCTTCGGACGGATGAAGAACTTGAGAATTCTTATAATTGCAAACACACACTTTTCCGAAGGTCCCCAAATTCTTCCAAATAGTTTGAGATTGCTTGATTGGAATGGATACCCATCATCCTCTTTACCATCCGATTTCAATCCTAAGAATCTTGTGATACTTAACCTGCCTGTATGTTGCATTAAGTGCGTCAATTATCTCAAGGTTTTCGAGACATTGATTTTTCTTAATTTTGAAGACTGCAAGTTCCTAACTGAAATACCTAGCTTATCTAGAGTACCAAATTTGGGGTCATTATGTCTTGATTACTGCACTGATTTATTTAGAATCCATGAATCAGTTGGTTTTCTTGACAAGCTTGTGTTATTAAGTGCTCAAGGATGCACACAACTAGAAAGTTTGGTTCCATGCATGAACTTGCCATCTCTAGAGACATTAGATCTTAGAGGTTGCTCGCGTCTTGAGAGCTTCCCAGAAGTACTAGGAGTGATGGAGAATTTAAAAGATGTTTATTTAGACCAGACTGCCCTAAAACAATTGCCTTTAACAATGGGGAATCTGATTGGGCTCCGACGTTTGTTCTTGAGGGGCTACCAAAGGATGATTCAGATACCAAGCTACGTATTGCCAAAATTTCAGATAGTATTATCAGATATATGTTGGGTATTTCGATCATCAAATGATGCAGAAAAAGTGAGTCCTAAAGTGTTTGCAAAGGCCATGTGTGTTTATAATGAATATGGGAAGTCCTTCCTTAATGTGTATTCTCTTAATATAAGTTCCAACAATGTCATAGAAGTATGTAATCCTTCATGGAATCAAGATGGGCACAAACTCAAAAATATTGGCCATCATCTCTTTTGTCACCCGATTCATTGTGGGAGAGTAATTATGGATAAGGTTAGAAGCAACGAATCGCCAGTGCATTTTTGGTTTCGAAAAAAATTCCCCAGGATTGCTCTATGCTGTTTTTGTGAAACTGGAGGGCTGTTTCACAACGTGGTGCTGGATTTCAAGTTGAATGTACTCATCAATGGCACTACGCAACTCTCTACTTCATGTGAATACATATATCATACAAAAAGAAAGATGCACCAAAAGCTTTGTTGTGATCTACAATGCAATAAGGAGGGTATATTCTCAGAGAATGAGTGGAACCATGTGGAGATTTTATTTGAGATTGAACATCTCATGCCATGTGATTCTGAAAGGGACATAACTTACCACGACTGGATCACTAAGAGGATTCTCAAGTCGTCTGTCATACATGTCTACAGTGAAAACAATGAGGATGATTTCAATTTAGTTGAGAATCCTGATTTTCCTCTGTCAACCGAACACAAATTTCAAGAGATGCAAAGAAAACTTAGAAGATTACAATTTATCCAACTACATTTGAATGATCATGTTACTCAATTTGTGCTAGAACCACATGGTAATTTACAATGTTTTCCACTGTAA 3117 0.3799 MAPPSLSTFPCNCTYDVFLSFRGKDTRNSITGHLYNSLNQRGIQTFIDDQEIQKGEEITPTLLQAIKQSKIFIVVFSTNYASSTFCLTELVTILECSKSQGRFFLPVFYDVDPSHIRNLTGTYAEAFAHHEVRFRDEKDKVQKWRDALRQAASVSGWHFQSGSEPEYKFIGKIVANVSIKINCVPLHVAHNPVGLESRIIKVASLLEFESDERVNMVGIYGIGGIGKSTTARAVHNLFADKFEGVCFLGDIRERAANHDLAQLQETLLSEILGEKDIKVGDVNKGMSIIKQRLQSKKVLLILDNVDKVQQLHALVGAHDWFGFGSKIIITTRDKHLLATHGIVKVYEVKQLKNEKAFELFSWHAFKNKKIDPSYVDIAKRAVSCCHGLPLALEVIGSQLFGKSLAVCRSSLDKYERVLHKDIHAILKISYDDLEENEKGIFLDIACFFNFHEIDYVKEILCYRGFHANNGIEQLTDKSLMKITNGCVRMHDLIQDMGREIVRQESALDPGRRSRLWFSDDIVHVLEENKGTDRIEVIIANPHERRKVKWCGKAFGRMKNLRILIIANTHFSEGPQILPNSLRLLDWNGYPSSSLPSDFNPKNLVILNLPVCCIKCVNYLKVFETLIFLNFEDCKFLTEIPSLSRVPNLGSLCLDYCTDLFRIHESVGFLDKLVLLSAQGCTQLESLVPCMNLPSLETLDLRGCSRLESFPEVLGVMENLKDVYLDQTALKQLPLTMGNLIGLRRLFLRGYQRMIQIPSYVLPKFQIVLSDICWVFRSSNDAEKVSPKVFAKAMCVYNEYGKSFLNVYSLNISSNNVIEVCNPSWNQDGHKLKNIGHHLFCHPIHCGRVIMDKVRSNESPVHFWFRKKFPRIALCCFCETGGLFHNVVLDFKLNVLINGTTQLSTSCEYIYHTKRKMHQKLCCDLQCNKEGIFSENEWNHVEILFEIEHLMPCDSERDITYHDWITKRILKSSVIHVYSENNEDDFNLVENPDFPLSTEHKFQEMQRKLRRLQFIQLHLNDHVTQFVLEPHGNLQCFPL 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo20g00009 1038 Pfam NB-ARC domain 202 404 IPR002182 GO:0043531
Mepo20g00009 1038 Gene3D Ribonuclease Inhibitor 542 836 IPR032675 -
Mepo20g00009 1038 Gene3D - 11 184 IPR035897 -
Mepo20g00009 1038 Pfam TIR domain 15 178 IPR000157 GO:0007165
Mepo20g00009 1038 Gene3D - 350 434 IPR042197 -
Mepo20g00009 1038 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 183 - -
Mepo20g00009 1038 Gene3D - 185 345 IPR027417 -
Mepo20g00009 1038 ProSiteProfiles TIR domain profile. 13 181 IPR000157 GO:0007165
Mepo20g00009 1038 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 157 IPR035897 -
Mepo20g00009 1038 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 726 IPR044974 GO:0006952
Mepo20g00009 1038 SUPERFAMILY "Winged helix" DNA-binding domain 421 526 IPR036390 -
Mepo20g00009 1038 PRINTS Disease resistance protein signature 292 306 - -
Mepo20g00009 1038 PRINTS Disease resistance protein signature 385 399 - -
Mepo20g00009 1038 PRINTS Disease resistance protein signature 216 231 - -
Mepo20g00009 1038 PRINTS Disease resistance protein signature 690 706 - -
Mepo20g00009 1038 SMART till_3 14 154 IPR000157 GO:0007165
Mepo20g00009 1038 SMART AAA_5 213 351 IPR003593 GO:0016887
Mepo20g00009 1038 SUPERFAMILY L domain-like 549 824 - -
Mepo20g00009 1038 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 444 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo20g00009 9 760 WRKY Transcription Factor Family AT4G12020 31.858 1.33e-91 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo20g00009 - - mtr:11415136 1478.38