Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo209g00003 ATGAACGAGAAAGCCAACGTTTCTAAAGAGCTCAACGCCAAACACAAAAAGATACTAGAAGGACTTCTTAAATTACCAGAGAATAGGGAATGTGCTGACTGCAAAGCTAAAGGACCAAGATGGGCTAGTGTCAATCTTGGCATTTTTATTTGCATGAGTTGTTCAGGAATACATCGAAGTCTTGGGGTACATATTTCAAAGGTTCGTTCTGCTACTTTGGACACCTGGCTCCCAGAGCAGGTTGCATTTATTCAATCTATGGGAAATGAGAGAGCAAATAGTTACTGGGAAGCAGAATTACCTACAAATTACGACAGAGTTGGCATTGAAAACTTCATCCGTGCAAAGTATGAAGACAAGAGATGGATTGCAAGGGATACTAAGCCAAAATCACCTTCTAGACTGATAGAAGAGAAAAGTCCTTCACAATGGCAAAAGCCCGTGGACAATACTTTTGAGGAAAGGAAGAAAATCCAACCGTCAAATGCAATTCCTGCTACTAGAATTAATGTTCTTGCTCCTCCTAAAGGACATGTGCAGGTAACTCCAGTGGCTAAGCATCAGCATATTGAGAAAGTGGAACCTCTGGTGACACAAGTGCAAGCTGAAACATCACAGACGACTGCTACAGTTTCTAATCCCCCTCCAAAAGTTGACTTTGCGACGGACCTTTTTGACATGCTGTCTATGGATGATCCAAATGAAAAGGGCTCTGACGCAGCTGATGCTACTGCTGACGATGATAACAACTGGGCAGGTTTTCAGTCTGCTGCAGAGACGTCAACAGCCGAGAAAACTGACCCCAGGAAATCGGTCGAGAGTACACCCCAGCCTACCTCTGGAATTGAGGATCTGTTTAACGACTCATCTTCAGTGACGCCAAGTTCTTCTCTTGAAAAACCACAAAAAGATGTAAAAAATGATATTATGAGCCTTTTTGAAAAGAACAACAATATAGTGTCTCCATTTGCTATGCATCAACAACAGTTGGCTATGCTGGCACAGCAACAGTCTCTTCTAATGGCAGCTGCTGCCGCTGCTAAATCTGCTAGTGGGGATGTGAAATATCCTGCTAATGTACAGCAACCTGGTTCCAACATTCCTTTCCAAAGTTGGCCAGCAGCAAGCTACCCAATTCCAGGAGTAATGCCCGTGGGTGGTCAGGGAGAATTGCAGAAAATTATGCAGACAATAAACATGACATCCGCTCATCCAGCAGGGAGCTCAGTTCAGTATCCACCATCTAGTTTTTTTACAATGCCGCAAGTTGCTCCAGTTAACGGCACAACAACAGCGGTGGCAAGTAAACCTCAATCAGCAACTCCGGTATCGACAAACACTACAAAAACGGCGAATGATTATGATTTTTCCTCGTTAACACAAGGAATGTTTGCGAAACCCTGA 1404 0.4359 MNEKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMSCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNERANSYWEAELPTNYDRVGIENFIRAKYEDKRWIARDTKPKSPSRLIEEKSPSQWQKPVDNTFEERKKIQPSNAIPATRINVLAPPKGHVQVTPVAKHQHIEKVEPLVTQVQAETSQTTATVSNPPPKVDFATDLFDMLSMDDPNEKGSDAADATADDDNNWAGFQSAAETSTAEKTDPRKSVESTPQPTSGIEDLFNDSSSVTPSSSLEKPQKDVKNDIMSLFEKNNNIVSPFAMHQQQLAMLAQQQSLLMAAAAAAKSASGDVKYPANVQQPGSNIPFQSWPAASYPIPGVMPVGGQGELQKIMQTINMTSAHPAGSSVQYPPSSFFTMPQVAPVNGTTTAVASKPQSATPVSTNTTKTANDYDFSSLTQGMFAKP 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo209g00003 467 CDD ArfGap 19 117 - -
Mepo209g00003 467 SMART arf_gap_3 16 129 IPR001164 GO:0005096
Mepo209g00003 467 Pfam Putative GTPase activating protein for Arf 17 125 IPR001164 GO:0005096
Mepo209g00003 467 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Mepo209g00003 467 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Mepo209g00003 467 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Mepo209g00003 467 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Mepo209g00003 467 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 466 IPR044520 GO:0005096
Mepo209g00003 467 Gene3D Arf GTPase activating protein 1 130 IPR038508 -
Mepo209g00003 467 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
Mepo209g00003 467 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Mepo209g00003 467 MobiDBLite consensus disorder prediction 229 243 - -
Mepo209g00003 467 MobiDBLite consensus disorder prediction 228 303 - -
Mepo209g00003 467 MobiDBLite consensus disorder prediction 272 300 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo209g00003 16 123 C2H2 Transcription Factor Family AT4G05330 49.138 1.23e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo209g00003 K12486 - gmx:100807561 687.567