Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04755 ATGGCTTCTTTGCTCCATCCAACTCCAACTCCAACTCCAACTGTTGCCACTATACTTAAGCAGCGAACATCAACAATCTGTTTCTTCTGTCCCTTAAAACCTACAAATGTTTCTTTCTTAACTAACACAAACCGTGTCAATACCAACACTACAAAGTGTAATGCATTTTTTGATAATAATGTCACCAATGGTTTGTTGGAGGTTGGTGGGGACCACATTCCTTCTTTCCTTCGATCAGGACTACTTCAGTTTCAAGAATTATCAGACATGCAGAGATGGGAGTTTCTTCTTTTTGGTGGACTCATATGGATATACTTAACTGCAAGACCAGGTGTTCTTATTGGTGCCATTGATGCTTATCTTTTTGCTCCTCTTCAACTTGGTTTTGACAATCTATCTGGAAGGAGAAACTTGAAGACTGGTGATTTTCTTGTTGGAGATAAAATCGGTGAAGGGTCATTTGGTGTTGTTTATTCTGGTGTTTTGGTCTCAAAGAATGTGGTGGATGTTGAGGTGGACAAGAGAGGAAGATCCAAGGCAACAAGGTTGGAACCCAAAACTAAGGATAAAGTTATTCTCAAAAAGGTTAAGGTTGGAATTCAAGGGGCTGCAGAATTTGGTGAATTTGAGGAATGGTTCAATTACCGGCTATCTAGAGCAGCTCCTGAAACATGTGCTGACTTCCTTGGAAGTTTTGTGGCTGATAAAACAAACTCACAGTTCACAAAAGGTGGAAAATGGCTTGTTTGGAAATTTGAGGGAGACCGTACTCTTGCCGATTACATGAAAGAGCGCAACTTCCCTTCAAACTTAGAATCTGTCATGTTTGGACGTGTGTTGCAAGGCGTAGATTCTTCTAGACGAAATGCATTGATCATCAAGCAAATAATGCGCCAGATAATTACTTCTCTTAAGAAAATTCATGATACAGGCATTGTTCACAGAGATATAAAGCCAGCCAACTTAGTGGTCACCAAACAGGGGCAGATTAAACTCATTGATTTTGGTGCAGCAACAGACCTTCGGATCGGAAAGAATTATGTTCCCGACCGCACCCTTTTGGATCCCGACTATTGCCCCCCAGAGCTCTATGTACTCCCAGAAGAAACACCAAGTCCTCCACCAGCGCCAATTGCTGCGTTCTTTTCACCAATCCTATGGCAGTTAAACAGCCCTGATCTGTTTGATACTTATTCGGCTGGGATTGTACTCCTTCAAATGGCAATACCAACCTTAAGGTCTCCTGCTGCTTTGAAGAATTTTAATTTGGAAATAAAAACCTGTGGATATGATTTGAAAAAATGGAGGGAGTATACTCGCCTCAGGCCCGACCTCCAAATTCTTGATAGTGAATCTGGTAGAGGTTGGGACTTGACAACAAAGCTTATATCTGAAAGAGGTCCCTTAAGAAGAGGACGTTTATCTGCTGCTTCAGCTTTGAGACATCCTTATTTTCTTCTAGGAGGTGATCAGGCAGCTGCAGTTCTTTCAAAATTAAGCTTAAGTAGAAAGTAA 1515 0.4132 MASLLHPTPTPTPTVATILKQRTSTICFFCPLKPTNVSFLTNTNRVNTNTTKCNAFFDNNVTNGLLEVGGDHIPSFLRSGLLQFQELSDMQRWEFLLFGGLIWIYLTARPGVLIGAIDAYLFAPLQLGFDNLSGRRNLKTGDFLVGDKIGEGSFGVVYSGVLVSKNVVDVEVDKRGRSKATRLEPKTKDKVILKKVKVGIQGAAEFGEFEEWFNYRLSRAAPETCADFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKERNFPSNLESVMFGRVLQGVDSSRRNALIIKQIMRQIITSLKKIHDTGIVHRDIKPANLVVTKQGQIKLIDFGAATDLRIGKNYVPDRTLLDPDYCPPELYVLPEETPSPPPAPIAAFFSPILWQLNSPDLFDTYSAGIVLLQMAIPTLRSPAALKNFNLEIKTCGYDLKKWREYTRLRPDLQILDSESGRGWDLTTKLISERGPLRRGRLSAASALRHPYFLLGGDQAAAVLSKLSLSRK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04755 504 Gene3D Phosphorylase Kinase; domain 1 131 252 - -
Mepo1g04755 504 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 57 504 - -
Mepo1g04755 504 Pfam Protein kinase domain 292 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04755 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 312 324 IPR008271 GO:0004672|GO:0006468
Mepo1g04755 504 SUPERFAMILY Protein kinase-like (PK-like) 138 486 IPR011009 -
Mepo1g04755 504 ProSiteProfiles Protein kinase domain profile. 143 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04755 504 SMART serkin_6 143 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g04755 504 Gene3D Transferase(Phosphotransferase) domain 1 283 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04755 Mepo-Chr1 55583852 55587160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04755 143 341 MAP Kinase Kinase Kinase AT3G13530 25.248 2.54e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Mepo1g04755 Pkinase 2.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04755 - - psat:127120955 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04755 1 55583852 55587160 Mepo3g01974 3 28999930 29001893 PCT