Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04751 ATGGATGATAGAGATGAGGCAATGAAGGAGCTTGTGAGAGGGCGTGAGTTAGCTAAGCAGCTTGGACAACATCTTAGTAACAACAACATTAATGATGAATTATTAGCGTTTTCACAACATCTTGTCAACAATGTTGTCAATTCATTTACCAATACCCTCTTCCTTTTGTATAAACATCATCAAAGGGAACAAGACTTTTCCTTAACTATTAAATCTGAAGAGGACTCTCAAGATAGTTGCAAGACTAGTTCCACCCGTGGTGCTAGAGGATCTCACAAAAGAAGAAGAACTACAGAAACGTGTGAGGAAGTATCAGAAAGACCAACAGATGATGGGCATGAATGGAGAAAGTATGGTCAAAAAACAATCCTCAATTCCAAATACTCAAGGGACTACTATAGGTGTACTCACAAGATAGATCAAAGATGCAAAGCAACCAAGCAAGTGCAGAGAATTGAAGAGAAGCCTCCCTTGTATAAGACCACCTATTACGGCCACCATACTTGTAACGAAGACAATATCATATTTGAACCCACTTCTCCTGATGATCCTACTACTTCCTCCATATTGCTTAGCTTTAACAACACATTCCCAACTCCAACCCAACAAGATTGTCCCTTTTTATCATCTTCGACATCATCATCATCTTCATCTTTTAATTCCTCACATTCAGTGGAATATTGCAAGGAGAACTCACCTTCCTTGGATGAATACCTGCTCTCTCCTCAACCAATTTTAGAATCTGATGATCACAGGGATATGACGATAATTTATGGTCTCTTGTATGATTCTGTTGAACTTGATACTGATTTCCTTCACCCTTTTCATGGGTTTCAATTATAG 843 0.3867 MDDRDEAMKELVRGRELAKQLGQHLSNNNINDELLAFSQHLVNNVVNSFTNTLFLLYKHHQREQDFSLTIKSEEDSQDSCKTSSTRGARGSHKRRRTTETCEEVSERPTDDGHEWRKYGQKTILNSKYSRDYYRCTHKIDQRCKATKQVQRIEEKPPLYKTTYYGHHTCNEDNIIFEPTSPDDPTTSSILLSFNNTFPTPTQQDCPFLSSSTSSSSSSFNSSHSVEYCKENSPSLDEYLLSPQPILESDDHRDMTIIYGLLYDSVELDTDFLHPFHGFQL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04751 280 MobiDBLite consensus disorder prediction 94 112 - -
Mepo1g04751 280 ProSiteProfiles WRKY domain profile. 104 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g04751 280 SMART WRKY_cls 109 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g04751 280 SUPERFAMILY WRKY DNA-binding domain 106 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g04751 280 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 203 IPR044810 GO:0003700
Mepo1g04751 280 Pfam WRKY DNA -binding domain 110 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g04751 280 MobiDBLite consensus disorder prediction 70 112 - -
Mepo1g04751 280 Gene3D WRKY domain 95 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04751 Mepo-Chr1 55566719 55567967 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04751 6 170 WRKY Transcription Factor Family AT3G56400 39.326 2.13e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo1g04751 WRKY 3.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04751 - - tpra:123884205 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01967 3 28948023 28950999 Mepo1g04751 1 55566719 55567967 PCT