Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04750 ATGGATCTTAGAAATGAGGCAATAGAGGAGGAGCTAGTGAGAGGGCGTGAGTTTGCAAACCAGCTTGGAAAAGTAATAACATTATTGACGAACAATAATAATCATCTTGTTCTTGTGAACAACATTATCAACTCATTTACAAATACCCTCACCCTTTTGAACAAACATCATAAAAGGGATTATTCCTTCATTAGTCCAACTAAATCTGAGGAGATCTCACAACATACTTCCACCACTGGTAGAGGATCTTACAAAAGAAGAGTAACTGCATCAACATGGGAGAAGATGTCAGAATGTCCAACAGATGATGGGTATGAATGGAGAAAGTATGGTCAAAAAACAATCCTCAATTCCAAATACTCAAGGAACTACTACAGGTGTACTCACAAGTTTGATCAAAGATGTCAAGCAACCAAACAAGTGCAGAGAATTGAAGAGAAACCTCCCTCATATAAGACCACATATTACGACCACCACACTTGCAATAACTCAGATGAAATCATATTTGAACCCACTTCTCCTCATGATCCTACTACTTCCTCCATATTGCTTAGCTTTAACAACACATTCCCAACTCCCACCCAACAAGATTGTCCCTTTTTATCATCACATGAACATTGTAAGGAGGAATTAGTAATTCCCTCACCTTCCTTAGATAATTATATTTCTACAAGCCAAGTCAGTAGTAATACTCAATCATCATCAACTACACTTGAATCTGATGATGATCGCAAGGATATGATGATGATGATGTATGGCGATCTCTTGTATGATTCTGTTGAGCTTGACCATCGTGATTTCTTTTACCCTTTTCTAGGGCTTTTGTAG 828 0.378 MDLRNEAIEEELVRGREFANQLGKVITLLTNNNNHLVLVNNIINSFTNTLTLLNKHHKRDYSFISPTKSEEISQHTSTTGRGSYKRRVTASTWEKMSECPTDDGYEWRKYGQKTILNSKYSRNYYRCTHKFDQRCQATKQVQRIEEKPPSYKTTYYDHHTCNNSDEIIFEPTSPHDPTTSSILLSFNNTFPTPTQQDCPFLSSHEHCKEELVIPSPSLDNYISTSQVSSNTQSSSTTLESDDDRKDMMMMMYGDLLYDSVELDHRDFFYPFLGLL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04750 275 SMART WRKY_cls 101 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g04750 275 MobiDBLite consensus disorder prediction 222 237 - -
Mepo1g04750 275 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 182 IPR044810 GO:0003700
Mepo1g04750 275 Pfam WRKY DNA -binding domain 102 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g04750 275 MobiDBLite consensus disorder prediction 222 242 - -
Mepo1g04750 275 SUPERFAMILY WRKY DNA-binding domain 98 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g04750 275 ProSiteProfiles WRKY domain profile. 102 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g04750 275 Gene3D WRKY domain 86 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04750 Mepo-Chr1 55560222 55561648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04750 10 206 WRKY Transcription Factor Family AT1G66550 34.300 3.53e-27 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo1g04750 WRKY 1.8e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04750 - - tpra:123884205 330.872