Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04741 ATGTTGGACTACGAATGGGGTAACCCAACAAACATCATGCTTACCGGAAATGAAGACAACAACTCCGCCGCAGCAGCAGCAGCAGCCTCTGATCAAGCCCACCGTCAAATCTTCGACCACTACGCTTCTCAAGCTATGTTATCCGACAGTTACCTTAACGGACCTGGTGCTGGACCCACCATCGACATAAACAGTGGTGATTTTACTCACCACCACCAGTTTAGCCCACAGGCCCAGCAACATCATATCCATCAGTCCTTCTTCGACCCACGGGCTTTCCATGGAGGGTCATCAACTGCTTCTTCTTACCCTCCACCTCAACCACAACCTCCTTCCATGCTCTCCCTTGACCCTCTTCCTGGTCATGGACATGGCCCTGGATTCCTCCTCGTACCAAAATCCGAGGATGTTAACAGGCCCATTGACTTCGTGGGTTCTAGACTTGGACTCAACCTTGGTGGCCGCACGTACTTCTCTTCCGAAGATGACTTCGTTAGCCGCCTTTACCGTCGGTCTAGACCACCTGAACCGGGTTCTACAGGTTCTTCGAACTCACCTAGGTGTCAGGCTGAAGGTTGCAATGCTGATCTATCTCAGGCTAAGCACTACCACCGCCGCCACAAAGTTTGTGAGTTTCACTCCAAGGCAGCCACCGTCGTTGCAGCTGGGTTGACTCAGCGGTTCTGCCAGCAATGCAGCAGGTTCCATCTTCTATCTGAGTTTGATAATGGAAAACGTAGCTGCAGGAAGAGATTGGCAGATCATAATCGTCGCAGGAGAAAAACTCAGCACCCAAATACTCAAGATATTCACAAATCTCACAATACTTTGGATAATTCTTCCACAAGATCCCCGCCAGAGTCTGGAACTCAATCTACATCGTCGGTGACTGTGGCGGTTTCTCCACCAGATTATTTTCGACAAAGGTCGTACCAAAGCCCAAGCCCTTCAACAACTTCAAGCTCAATGTTTTTCTCCACCGGGTAG 987 0.5015 MLDYEWGNPTNIMLTGNEDNNSAAAAAAASDQAHRQIFDHYASQAMLSDSYLNGPGAGPTIDINSGDFTHHHQFSPQAQQHHIHQSFFDPRAFHGGSSTASSYPPPQPQPPSMLSLDPLPGHGHGPGFLLVPKSEDVNRPIDFVGSRLGLNLGGRTYFSSEDDFVSRLYRRSRPPEPGSTGSSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKAATVVAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQHPNTQDIHKSHNTLDNSSTRSPPESGTQSTSSVTVAVSPPDYFRQRSYQSPSPSTTSSSMFFSTG 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04741 328 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 170 320 IPR044817 GO:0003677
Mepo1g04741 328 MobiDBLite consensus disorder prediction 251 328 - -
Mepo1g04741 328 SUPERFAMILY SBT domain 186 265 IPR036893 GO:0003677|GO:0005634
Mepo1g04741 328 MobiDBLite consensus disorder prediction 89 131 - -
Mepo1g04741 328 MobiDBLite consensus disorder prediction 269 328 - -
Mepo1g04741 328 ProSiteProfiles Zinc finger SBP-type profile. 185 262 IPR004333 GO:0003677
Mepo1g04741 328 Pfam SBP domain 188 261 IPR004333 GO:0003677
Mepo1g04741 328 Gene3D - 178 249 IPR036893 GO:0003677|GO:0005634
Mepo1g04741 328 FunFam Squamosa promoter-binding-like protein 14 179 249 - -
Mepo1g04741 328 MobiDBLite consensus disorder prediction 251 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04741 Mepo-Chr1 55437763 55440166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04741 1 235 SBP-box Gene Family AT1G02065 43.798 1.13e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mepo1g04741 SBP 4.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04741 - - gmx:100802206 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04741 1 55437763 55440166 Mepo1g04741 1 55437763 55440166 ECH