Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04734 ATGGAAAAACATATCAATATGGAAAGTGATGCTGATGACACTTCTAGCACACCCTCTTTCTCCTCCTCCACAACAACATGTACTTCATCAAATTCAGATACATGCACCAAACAAGACATCAAAGCCTCTTCAAATGAGAGTAAGAAAAGGAAGAGAAGTGAAGTTGAAAATAATAATAGCACACATCCAACTTATAGAGGAGTAAGGAAGAGAAATTGGGGGAAATTTGTGTGTGAGATTCGTGAGCCAAAGAAAAAATCAAGAATATGGCTTGGAACATACCCTACAGCTGAAATGGCAGCTAGAGCACATGATGTAGCTGCTTTAGCTATAAAGGGTCATTCAGCATACCTTAATTTCCCTGAATTGGTACACCAACTTCCAAGGCCAATAAGTACTTCTACAAAAGACATTCAAGCTGCTGCTGCAAAAGCTGCAAACACTGTATTTGTAGCTGAACCAAGACAAGAAGAACATGCCTCACCTTCAAGTTCAACATTTACCAATAATGATGATGCAACATTGTTTGATTTGCCAGATCTTTTTCCTGATGATGGAAACAATGGACTTTGTTCCTATTCTTCTAAAAATTCTTCTTGGTATTTATGTGCAGTTGATAGTGGATTTAGGCTTGAGGAACCATCGTTTTGGGAGAAATACTAG 663 0.3816 MEKHINMESDADDTSSTPSFSSSTTTCTSSNSDTCTKQDIKASSNESKKRKRSEVENNNSTHPTYRGVRKRNWGKFVCEIREPKKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPELVHQLPRPISTSTKDIQAAAAKAANTVFVAEPRQEEHASPSSSTFTNNDDATLFDLPDLFPDDGNNGLCSYSSKNSSWYLCAVDSGFRLEEPSFWEKY 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04734 220 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 44 184 - -
Mepo1g04734 220 SMART rav1_2 64 127 IPR001471 GO:0003700|GO:0006355
Mepo1g04734 220 ProSiteProfiles AP2/ERF domain profile. 64 121 IPR001471 GO:0003700|GO:0006355
Mepo1g04734 220 MobiDBLite consensus disorder prediction 11 41 - -
Mepo1g04734 220 FunFam Ethylene-responsive transcription factor 2 64 122 - -
Mepo1g04734 220 SUPERFAMILY DNA-binding domain 64 122 IPR016177 GO:0003677
Mepo1g04734 220 MobiDBLite consensus disorder prediction 42 57 - -
Mepo1g04734 220 MobiDBLite consensus disorder prediction 1 66 - -
Mepo1g04734 220 Gene3D AP2/ERF domain 64 123 IPR036955 GO:0003700|GO:0006355
Mepo1g04734 220 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Mepo1g04734 220 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Mepo1g04734 220 CDD AP2 65 123 IPR001471 GO:0003700|GO:0006355
Mepo1g04734 220 Pfam AP2 domain 63 114 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04734 Mepo-Chr1 55359404 55360117 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g04734 49 216 AP2-EREBP Transcription Factor Family AT2G44940 49.528 3.75e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo1g04734 AP2 3.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04734 - - gmx:100776436 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04734 1 55359404 55360117 Mepo1g04734 1 55359404 55360117 ECH